DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6791 and pzg

DIOPT Version :10

Sequence 1:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_649297.1 Gene:pzg / 40351 FlyBaseID:FBgn0259785 Length:996 Species:Drosophila melanogaster


Alignment Length:745 Identity:138/745 - (18%)
Similarity:219/745 - (29%) Gaps:236/745 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 LREKSFRENDDL---------GEESDRIEVRNELLEPDADESG-------------TQEQTVSEE 331
            |...::|:.::|         |....||.....::.|.....|             .|:|.|::.
  Fly     5 LNPATYRKFNNLLSSGAVTVTGPSQPRILKSTRMVVPGGGGGGGASAGGASAVGGVAQQQAVNDA 69

  Fly   332 VSKKKAGTRGAAELCEDYIHYMCPD-CG-----TD-CDTHAQWSQHIEFVHDYVSRRGLNFRSV- 388
            .| ...|..|.|..|     |:|.| |.     || |.||..    .:|.:......|..|..: 
  Fly    70 ES-GGVGIGGLATRC-----YICDDRCEPQTSLTDMCTTHTS----TKFPNKLAQLVGEGFLVIV 124

  Fly   389 -DMQMQCLECKKIVT-----PNTIKSLRAHKFSHLSQPEWLRCKLCYKGYTDHQEIIRHLLQQHH 447
             .....|..|..:|.     .|.::.::.:..|.|:           |.|.              
  Fly   125 CGEDYVCSRCTNLVNYYDRLENDVERVKTNLISLLN-----------KKYA-------------- 164

  Fly   448 MDTLMSEDAEEE-----------DGDAPSAIEDECDGD--------NGN--GEGNGAPLDEDSPY 491
                ::||..:|           .|.|..::|:....|        .||  |:...||....|..
  Fly   165 ----INEDMGQEGSPPLKMQKMVGGSANRSLEESPSADLLRPRKLLQGNPVGQSKIAPGTTQSSV 225

  Fly   492 --FEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLNFEMINERQ 554
              .:...|:..:|           |.|..|..:..:.:.:.||              :|...::.
  Fly   226 QGTQTVQRKATKI-----------YKCTSCDYKTSDMRLFNTH--------------YETCKQQT 265

  Fly   555 LKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATHHRVGWPRKLS 619
            .:|..|.||..: :|..  :||.:..........|..||.::.:...|.||:.|:|........:
  Fly   266 FQCKTCRKIFPH-FGAM--KQHMVRDHNTAMDNTCAMCHINFVNENSLRKHMETNHATNVLVTST 327

  Fly   620 GGCPAPILTPAKQPRKQIVTVANETY--EIIYLDDVDQGGMEEDNDFGEQMQAEEDEYPIAPPPP 682
            ...||. ..|...........|||..  ..:|..:..|....:...|.|.|:..      |...|
  Fly   328 TTIPAS-AAPVAAAAAAAAAAANENLVGTSLYTCNHCQFKSTDKVVFDEHMRKH------AAGKP 385

  Fly   683 SPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCRKTVVRRRRQPVMSSADPSVPTVE 747
            .|              :||..|...|.|:.|..||..:                          .
  Fly   386 KP--------------FKCRLCSQRFETREAATVHAKQ--------------------------H 410

  Fly   748 QNYIFLCPSCGFEYKTQFEWRRHINEVHNFDK----------RQYLNMRQLDKYRYQCTQCKDIV 802
            |...|.|.:|...:..:....:|. |||....          .|.||.::|      ..:..|..
  Fly   411 QTNFFKCGTCSMTFPKREMLVKHF-EVHQSPSASTVSPKQSVSQNLNTQKL------LQETIDEA 468

  Fly   803 CNSKLKGL---------QDHHFRHLPYRLYLKCLICG------TCYNHKPNIAAHLRARH----- 847
            .:..|...         .:::.|      :..|.||.      |.|||  ::..|.|.:.     
  Fly   469 LSDSLPASTAAVVATTESENNIR------FFSCSICSLTFIQETYYNH--HMETHRRDKKATSAG 525

  Fly   848 --SIFDRETPTMITKPKQVLGRYKDNSREN----------PKLPSPPPAPALAPAPPSPPA---- 896
              ::....|..:..:|.:..|:..|.|.|.          .||.|.......||.|.|...    
  Fly   526 ATALNSAATALLSDEPGEATGKAGDESGEQNAEADIESLFEKLHSDKNESGEAPKPGSKGGEMVI 590

  Fly   897 CSSSAAASASSRSLKPQPGGLPARPAGLNT 926
            .|...:...:.....|||.|..::....||
  Fly   591 TSQEGSGGITFNITIPQPDGDQSQKDSPNT 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368
C2H2 Zn finger 208..230 CDD:275368
C2H2 Zn finger 235..256 CDD:275368
C2H2 Zn finger 516..532 CDD:275368 2/15 (13%)
C2H2 Zn finger 557..580 CDD:275368 7/22 (32%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
COG5236 <939..>1096 CDD:227561
pzgNP_649297.1 C2H2 Zn finger 241..263 CDD:275371 5/35 (14%)
C2H2 Zn finger 268..289 CDD:275371 7/23 (30%)
C2H2 Zn finger 297..318 CDD:275371 7/20 (35%)
C2H2 Zn finger 360..380 CDD:275368 4/19 (21%)
zf-H2C2_2 373..399 CDD:463886 10/45 (22%)
C2H2 Zn finger 390..410 CDD:275368 7/45 (16%)
C2H2 Zn finger 417..437 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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