DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6791 and CG1602

DIOPT Version :10

Sequence 1:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_610291.2 Gene:CG1602 / 35684 FlyBaseID:FBgn0033186 Length:577 Species:Drosophila melanogaster


Alignment Length:706 Identity:128/706 - (18%)
Similarity:217/706 - (30%) Gaps:267/706 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 KCYICKREYKYR--QDLMVHLRMVHCDEVVAMMREGYNAAG-------------RKTRVRESRTE 286
            :|..|..:.:..  |:.::|:|.||  ..|..|.:.:...|             .|.:..||..:
  Fly    19 RCSYCPTDVEVAQWQEFVLHIRNVH--SKVRSMEDDFEPVGENSTESGHVDPPEEKPQAEESIFQ 81

  Fly   287 Q---------LLREKSFRENDDLGEESDRIEVRNELLEPDADESGTQEQTVSE----EVSKKKAG 338
            |         .|...:.|.:.:..||||...|.:|       |...|::..||    :.:.|...
  Fly    82 QDESADGACVQLHIDAVRSSTNETEESDVSLVTDE-------EESVQDEDPSEPALDDANLKTTP 139

  Fly   339 T-----------RGAAELCEDYIHYMCPDCGTDCDTHAQWS-QHIEFVHDYVSRRGLNFRSVDMQ 391
            |           ....:..|.|..:.|           .|: .|.::......:..|...::|::
  Fly   140 TYKFHPSFFRRDHRTIKFIEIYKEHPC-----------LWNPAHSDYKEPKKCKEALKRMAIDLE 193

  Fly   392 MQC----------LECKKI-VTPNTIKSLRAHK--FSHLSQPEWLR---CKLC--------YKGY 432
            ...          |..||: :..||:     ||  .|...:|:.|.   .|||        .:|.
  Fly   194 ATVSVFLNEMALKLAIKKVHMQFNTV-----HKRVVSGKQKPQSLAFSIYKLCCFLNASNDEEGA 253

  Fly   433 TDHQEIIRHLLQQHHMDTLMSEDAEEEDGDAPSAIED---ECDGDNGNGEGNGAPLDEDSPYFED 494
            |::::|.....:::.:.|    |..|...:.|...:.   |....:...:...:...|.|....|
  Fly   254 TNNEKIKLDFSKKNKLTT----DLIEMYANFPQLYDSNHKEFSNMSSRKQAYESMAAEISVPNVD 314

  Fly   495 APRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHW----RTHVVMAHSMNDLSKLNFEM------ 549
                   |:|||||            :.....:.|    ..|.:.|.|..:  |...|:      
  Fly   315 -------INSDDIF------------RAIQNLRQWYYKNTKHAIYAGSTAE--KFYLEVCRFMPA 358

  Fly   550 -INERQLKCTECDKIITNAYGIQN--AQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATHHR 611
             :.:::|.|..|.:|.::.:.:|:  .:.|.|..||||    |..|.:|:..|..|..|:...| 
  Fly   359 KMYKQRLVCEFCHQITSSDHVLQSHIFKAHNIGELPFK----CTLCDRSFVGRCELANHIQRVH- 418

  Fly   612 VGWPRKLSGGCPAPILTPAKQPRKQIVTVANETYEIIYLDDVDQGGMEEDNDFGEQMQAEEDEYP 676
            :|                                                               
  Fly   419 IG--------------------------------------------------------------- 420

  Fly   677 IAPPPPSPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCRKTVVRRRRQPVMSSADP 741
                                :.:||.||...||..:.:::||......|.               
  Fly   421 --------------------KTHKCTHCERSFAVMSDLQLHIRTHTGHKP--------------- 450

  Fly   742 SVPTVEQNYIFLCPSCGFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYR-YQCTQC-KDIVCN 804
                      ::|..||..::.:.:...|:..:|.             |.| ::||.| ||.|  
  Fly   451 ----------YVCEHCGKAFRLRSQMTLHVTAIHT-------------KIRAFKCTMCPKDFV-- 490

  Fly   805 SKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRARHSIFDRETPTMITK 860
             |...|.||...||..|..: |.:||     |...:.|...||.....|....:.|
  Fly   491 -KKVDLSDHIKGHLNIRDKI-CSVCG-----KGFTSCHALIRHRQIHSEVKKFVCK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368
C2H2 Zn finger 208..230 CDD:275368
C2H2 Zn finger 235..256 CDD:275368 4/20 (20%)
C2H2 Zn finger 516..532 CDD:275368 1/19 (5%)
C2H2 Zn finger 557..580 CDD:275368 6/24 (25%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
COG5236 <939..>1096 CDD:227561
CG1602NP_610291.2 MADF_DNA_bdg 157..244 CDD:463144 20/102 (20%)
MADF_DNA_bdg 273..356 CDD:463144 18/103 (17%)
C2H2 Zn finger 367..388 CDD:275368 4/20 (20%)
C2H2 Zn finger 397..418 CDD:275368 6/20 (30%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
zf-H2C2_2 437..460 CDD:463886 6/47 (13%)
C2H2 Zn finger 453..470 CDD:275368 3/16 (19%)
C2H2 Zn finger 482..502 CDD:275368 10/22 (45%)
C2H2 Zn finger 510..530 CDD:275368 7/24 (29%)
C2H2 Zn finger 538..559 CDD:275368 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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