DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6791 and Znf48

DIOPT Version :10

Sequence 1:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001388702.1 Gene:Znf48 / 103690203 RGDID:9115869 Length:590 Species:Rattus norvegicus


Alignment Length:850 Identity:166/850 - (19%)
Similarity:243/850 - (28%) Gaps:373/850 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EREEEDDYEKNSKEPKQPDPDDDALFDFNMEPIVDIAEPQRPSLAPAGPMS--------QQVRPP 119
            |....|::|...:|...|:..::       |.:....|....||.|.|..|        :.:...
  Rat     2 EASPVDEFEHTPQERDGPEFKEE-------EQLGPGHEVGNASLKPEGIQSWDDLWVRREGLGKH 59

  Fly   120 MQRHSFPGAGGRPRLGSGLSVRPTTSQINATDENGVPINYELGVVYICPACGGEFRQQDHWKRHM 184
            ..|.:.|...|.||.|.|.:.|..                      :|..||..|||.....:|.
  Rat    60 QPRDAVPRVLGEPRWGQGSNDRAA----------------------VCGECGKSFRQMSDLVKHQ 102

  Fly   185 NHIHKYNTLRGLNFTPLDKLYQRCRECNKRIAMHSRENLLKHKFTHL---PFRC----------- 235
                  .|..|      :|.| :|..|.|.....|..  :||:.||.   |:|.           
  Rat   103 ------RTHTG------EKPY-KCGVCGKGFGDSSAR--IKHQRTHTGEKPYRVRPPAPGPPKMP 152

  Fly   236 ----------TKCYICKREYKYRQDLMVHLRMVHCDE---VVAMMREGYNAAGRKTRVRESRTEQ 287
                      |.|..|.:.::...||:.|.| .|..|   ...:..:|:..:  ..|::..||.:
  Rat   153 RSRIPAGERPTICGECGKSFRQSSDLVKHQR-THTGEKPYKCGICGKGFGDS--SARIKHQRTHR 214

  Fly   288 LLREKSFRENDDLGEESDRIEVRNELLEPDADESGTQEQTVSEEVSKKKAGTRGAAELCEDYIHY 352
                         |::..|..|...  :|        .|...|...:.||..:          .|
  Rat   215 -------------GDQLPRPVVPRR--QP--------SQAAPEATHRPKAQDK----------PY 246

  Fly   353 MCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKKIVTPNTIKSLRAHKFSHL 417
            :|.|||.            .||                    |.|          ||.:|:.|||
  Rat   247 ICTDCGK------------RFV--------------------LSC----------SLLSHQRSHL 269

  Fly   418 SQPEWLRCKLCYKGYTDHQEIIRHLLQQHHMDTLMSEDAEEEDGDAPSAIEDECDGDNGNGEGNG 482
            . |:...|.:|.|.:....::::||              ....|:.|                  
  Rat   270 G-PKPFGCDVCGKEFARGSDLVKHL--------------RVHTGEKP------------------ 301

  Fly   483 APLDEDSPYFEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEK----KHWRTHVVMAHSMNDLS 543
                                           ||||:|||.|.:.    ||.|||           
  Rat   302 -------------------------------YLCPECGKGFADSSARVKHLRTH----------- 324

  Fly   544 KLNFEMINERQLKCTECDKIITNAYGIQNA-QQHRITHL-----PFKAYARCRKCHKSYTDRKGL 602
                  ..:|...|.||::    ::.:.:. .:||:||:     .|.||.               
  Rat   325 ------SGQRPHACPECNR----SFSLSSTLLRHRLTHMEPQDFSFSAYP--------------- 364

  Fly   603 VKHLATHHRVGWPRKLSGGCPAPILT-PAKQPRKQIVTVANETYEIIYLDDVDQGGMEEDNDFGE 666
            |..|           :....|.|:.| |:..||..                    ....|..|| 
  Rat   365 VAPL-----------IPSPPPPPLGTSPSLTPRSP--------------------SQSSDGPFG- 397

  Fly   667 QMQAEEDEYPIAPPPPSPPPPPQPTTQGNHQRYKCVHCGTLFATQAAV----RVHISEK-----R 722
             :...|.| |..|....||||     ....:.:||..||..|...:.:    |||..||     .
  Rat   398 -LPGLEPE-PGGPQAGEPPPP-----LAGDKPHKCPECGKGFRRSSDLVKHHRVHTGEKPYLCPE 455

  Fly   723 CRKTVV--------------RRRRQP----VMSSADP--SVPTVEQ----------NYIFLCPSC 757
            |.|...              .|.|.|    ::...:|  |||.|.|          :.:.:|..|
  Rat   456 CGKGFADSSARVKHLRTHQGERTRPPPPPTLLRPHNPPGSVPIVPQSRVQGQPSGPSQLHVCGFC 520

  Fly   758 GFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQD------HHFR 816
            |.|:....:..:| ...|..:|            .|:|.:|.        ||..|      |...
  Rat   521 GKEFPRSSDLVKH-RRTHTGEK------------PYKCAECG--------KGFGDSSARIKHQRG 564

  Fly   817 HLPYR 821
            ||..|
  Rat   565 HLALR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368 7/20 (35%)
C2H2 Zn finger 208..230 CDD:275368 6/21 (29%)
C2H2 Zn finger 235..256 CDD:275368 6/41 (15%)
C2H2 Zn finger 516..532 CDD:275368 9/19 (47%)
C2H2 Zn finger 557..580 CDD:275368 5/23 (22%)
C2H2 Zn finger 589..609 CDD:275368 2/19 (11%)
COG5236 <939..>1096 CDD:227561
Znf48NP_001388702.1 zf-C2H2 84..105 CDD:395048 7/26 (27%)
C2H2 Zn finger 85..105 CDD:275368 7/25 (28%)
zf-H2C2_2 97..120 CDD:463886 8/35 (23%)
C2H2 Zn finger 113..133 CDD:275368 6/21 (29%)
COG5048 161..571 CDD:227381 124/646 (19%)
C2H2 Zn finger 165..185 CDD:275368 6/20 (30%)
C2H2 Zn finger 193..213 CDD:275368 3/21 (14%)
C2H2 Zn finger 248..268 CDD:275368 11/61 (18%)
C2H2 Zn finger 276..296 CDD:275368 5/33 (15%)
C2H2 Zn finger 304..324 CDD:275368 9/19 (47%)
C2H2 Zn finger 332..352 CDD:275368 5/23 (22%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
C2H2 Zn finger 453..537 CDD:275368 16/84 (19%)
C2H2 Zn finger 545..565 CDD:275368 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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