DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and USP6

DIOPT Version :9

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001291213.1 Gene:USP6 / 9098 HGNCID:12629 Length:1406 Species:Homo sapiens


Alignment Length:348 Identity:97/348 - (27%)
Similarity:151/348 - (43%) Gaps:58/348 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VSSCPDRNGFYGGFQRTDKPKEPLSKAQIIARE----KKWLYMIDNWSIYMSKNYKKIRDRCRKG 77
            ::|..||   :|....|:.|.....:|:.|.||    .||:.|:..|..|  |:..|:.||..||
Human    41 INSSIDR---FGILHETELPPVTAREAKKIRREMTRTSKWMEMLGEWETY--KHSSKLIDRVYKG 100

  Fly    78 IPKSVRPKAWFYLSGAYLLKKKNPNVYNELLEKPGNPTT--IEEIKKDKHRQFPFHEMFLDEQKV 140
            ||.::|...|..|.....:|.|||..| :::::.|..::  |..|..|.......|..|.|....
Human   101 IPMNIRGPVWSVLLNIQEIKLKNPGRY-QIMKERGKRSSEHIHHIDLDVRTTLRNHVFFRDRYGA 164

  Fly   141 GQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVYLQDYFIPGLEVIQ 205
            .|.|||.:|.|||.|||:||:|:..:.|.|..|::||.|||||..|.:  :..:.:.:||..  .
Human   165 KQRELFYILLAYSEYNPEVGYCRDLSHITALFLLYLPEEDAFWALVQL--LASERHSLPGFH--S 225

  Fly   206 NDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWF-----LCAMTRTL-----------PWETL 254
            .:.|.::||         :..|:|.|......|.|.     ||....:|           .....
Human   226 PNGGTVQGL---------QDQQEHVVPKSQPKTMWHQDKEGLCGQCASLGCLLRNLIDGISLGLT 281

  Fly   255 LRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEEFIINNMMR 319
            ||:||.:|.||.:|:..:..:    :|...:.|...|..|...|.||:        :|.....|.
Human   282 LRLWDVYLVEGEQVLMPITSI----ALKVQQKRLMKTSRCGLWARLRN--------QFFDTWAMN 334

  Fly   320 LNLRVEDFQIEHTRQKARRAKQK 342
                 :|..::|.|...::..:|
Human   335 -----DDTVLKHLRASTKKLTRK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 RabGAP-TBC 114..277 CDD:366170 52/180 (29%)
USP6NP_001291213.1 TBC 97..312 CDD:214540 67/232 (29%)
DUF4607 <332..407 CDD:292024 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..380 1/5 (20%)
UBP12 <528..1114 CDD:227847
Peptidase_C19 533..>723 CDD:271592
Peptidase_C19 <1023..1367 CDD:271592
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1120..1231
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1384..1406
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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