DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and sgsm2

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_068069810.1 Gene:sgsm2 / 799094 ZFINID:ZDB-GENE-131119-52 Length:1057 Species:Danio rerio


Alignment Length:226 Identity:46/226 - (20%)
Similarity:83/226 - (36%) Gaps:58/226 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 ELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAED-AFWVFVSVCDVYLQDYFIPG------- 200
            :|.|::.:|...:.::|:.|....:.|.|::.|..|. |:..|..:.....|::...|       
Zfish   869 KLRNIMCSYVWEHLEIGYVQGMCDLLAPLMVILDDECLAYSCFTQLMRRMSQNFPTGGAMDTHFA 933

  Fly   201 -----LEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDC 260
                 ::::  |:.:.| |:.:...  |.|        ..:...|||....|.|.:|.:..||  
Zfish   934 NMRSLIQIL--DSELFE-LMHQNGD--YTH--------FYFCYRWFLLDFKRELLYEDVFAVW-- 983

  Fly   261 FLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEEFIINNMMR------ 319
               |.|.|..:::        |:|.|......|.|            |..:.|::|.|.      
Zfish   984 ---EVIWVAPRIS--------SKHFVLFIALALVE------------VYRDIILDNNMDFTDIIK 1025

  Fly   320 -LNLRVEDFQIEHTRQKARRAKQKAQQEAES 349
             .|...|...::|..:.||....|.|...|:
Zfish  1026 FFNEMAERHDVQHILRMARELVHKVQTLIEN 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 29/146 (20%)
sgsm2XP_068069810.1 RUN 19..201 CDD:459241
PH_RUTBC 262..432 CDD:275431
TBC <845..1014 CDD:214540 35/182 (19%)
Blue background indicates that the domain is not in the aligned region.

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