DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and tbc1d2b

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_012822167.2 Gene:tbc1d2b / 734055 XenbaseID:XB-GENE-5932742 Length:944 Species:Xenopus tropicalis


Alignment Length:383 Identity:100/383 - (26%)
Similarity:177/383 - (46%) Gaps:54/383 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TVSSCPDRNGFYGGFQRTDKPKEPLSKAQIIAREKKWLYMIDN--------WSIYMSKNYKK--- 69
            |||.. |.:||.  ....|..:|....|::.|.:.|.|.:.:|        |..|.:....:   
 Frog   570 TVSKY-DIHGFL--IVPEDDEEEEKLVAKVRALDLKTLSLTENQEISNVVKWDNYFASTVNREMA 631

  Fly    70 ----IRDRCRKGIPKSVRPKAWFYLSGAYLLKKKN---PNVYNELLE---KPGNPTTIEEIKKDK 124
                ::...|.|||...|.:.|.:.:..::.|.|:   |..:..||:   :..||.: ::|:.|.
 Frog   632 CSPELKALVRNGIPHEHRSRMWKWFTNLHIKKLKDEAAPGYFQSLLQNALEKQNPAS-KQIELDL 695

  Fly   125 HRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVC 189
            .|..|.::.:......|..:|.|||.|||..||.:|:||....:||..|::|..|||||..|::.
 Frog   696 MRTLPNNKHYTSPTSEGIQKLRNVLLAYSWRNPDIGYCQGINRLAAIALLYLDQEDAFWCLVTIV 760

  Fly   190 DVYL-QDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWET 253
            :.:: :||:...|...|.|..:.:.|:.:..|.:..|.:::||:..|...:|||.....::..:.
 Frog   761 EAFMPRDYYTKTLLGSQVDQRVFKDLMNEKLPRLCAHFEQYKVDYTLITFNWFLVVFVDSVVSDI 825

  Fly   254 LLRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAV---LRSPEEHIVEEEFIIN 315
            |.|:||..|.||.:|||:.||     .|.::| .:....|.:::::   ||.....|::...:.|
 Frog   826 LFRIWDSLLYEGSKVIFRFAL-----GLFKYK-EEEILKLQDSMSIFKYLRYFSRTILDARKLCN 884

  Fly   316 ----NMMRLNLR---------VEDFQIEHTRQKARRAKQKAQQEAESSGSGNGHRRNM 360
                :|....||         :|..::|.:..:|.||....::|.      |..||::
 Frog   885 IAFVDMNPFPLRQIRNRRTYHLEKVRLELSELEAIRADFIRERET------NPERRDL 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 66/210 (31%)
tbc1d2bXP_012822167.2 PH_TBC1D2A 34..134 CDD:269966
Smc 322..>560 CDD:440809
TBC 640..857 CDD:214540 68/223 (30%)
Blue background indicates that the domain is not in the aligned region.

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