DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and usp6nl

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_005164934.2 Gene:usp6nl / 561983 ZFINID:ZDB-GENE-041210-192 Length:849 Species:Danio rerio


Alignment Length:327 Identity:99/327 - (30%)
Similarity:159/327 - (48%) Gaps:28/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DRNGFYGGFQRTDKPKEPLSKAQIIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKA 86
            ||.||....:......|...|...:.|..|||.|:.:|..|  ||..|:..|..||||..:|.:.
Zfish    70 DRFGFLHEGELVYDIVEEKQKQLEVERTTKWLKMLKSWEKY--KNSDKLVRRIYKGIPLQLRGQV 132

  Fly    87 WFYLSGAYLLKKKNPNVYNEL-LEKPGNPTTIEEIKKDKHRQFPFHEMFLDEQKVGQIELFNVLK 150
            |..|.....:|::..:.|.:| :...|....:.:|..|.:|.:..|.||:....|.|.:||:||.
Zfish   133 WCLLLDIPKIKEEKKDFYEKLKIRARGLSPDVRQIDLDVNRTYRNHIMFMHRYDVKQQDLFHVLT 197

  Fly   151 AYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVY---LQDYFIPGLEVIQNDAGILE 212
            |||:||.:||:||..:.|.|.||:::..|||||..|.:....   :..:|:||...:.......:
Zfish   198 AYSVYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQRHTMHGFFVPGFPKLMRFQEHHD 262

  Fly   213 GLLKKTCPPVYRHLQKHKVEPLLYMTDWFL-CAMTRTLPWETLLRVWDCFLAEGIRVIFKVALVI 276
            .:|:|..|.:.:||...:|...||...||. |.:.|| |:...||:||.::.||.||:..::..|
Zfish   263 RILQKMMPKLKQHLDNQEVYTSLYTMKWFFQCFLDRT-PFTLTLRIWDIYILEGERVLTAMSYTI 326

  Fly   277 IGASLSRHK---VRKTCTGLCETLAVLRSPEEHIVEEEFIINNMMRLNLRVEDFQIEHTRQKARR 338
                |..||   ::.:...|.:.|.|..| .:...|::|:|.            |::::..:.||
Zfish   327 ----LKLHKKTLLKLSMEELVKFLQVTLS-NDFFFEDDFVIE------------QLQNSMSELRR 374

  Fly   339 AK 340
            :|
Zfish   375 SK 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 68/208 (33%)
usp6nlXP_005164934.2 None

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