DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and rabgap1

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_073770556.1 Gene:rabgap1 / 559632 ZFINID:ZDB-GENE-170622-1 Length:1076 Species:Danio rerio


Alignment Length:385 Identity:100/385 - (25%)
Similarity:175/385 - (45%) Gaps:48/385 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 APRSLDTISLCSTVSSCPDRNGFYGGFQRTDKPKEPLSKAQIIARE------KKWLYMIDNWSIY 62
            :|..|.:.|..|||.|.|:.:      :..|..:..||.:..:::|      :.|..::..|.:.
Zfish   500 SPGVLSSGSHGSTVPSPPEDD------EEEDNDEPLLSGSGDVSKECAEKILETWGELLSRWHLN 558

  Fly    63 MSKNYKKIRDRCRKGIPKSVRPKAWFYLSGAYLLKKKNPNV---YNELLEKPGNPTTIEEIKKDK 124
            ::...|::....|.|:|:::|.:.|..|:|.:    .|.::   |..|:.|.....:  .|.:|.
Zfish   559 LAVRPKQLPALVRSGVPEALRGEVWQLLAGCH----NNDHLVEEYRTLITKESPQDS--AITRDI 617

  Fly   125 HRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVC 189
            :|.||.|:.|.|....||..|:.:.||||:|:.::|:||.|:.:||.||:|:|.|.||.|.|.:.
Zfish   618 NRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIM 682

  Fly   190 DVY-LQDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWET 253
            ..| |::.|....|.:......||.|:::..|.:|.|.....:|..:|.:.|||...|...|...
Zfish   683 FEYGLRELFKQNFEDLHCKFFQLERLMQECIPDLYTHFLNLGLEAHMYASQWFLTLFTAKFPLYM 747

  Fly   254 LLRVWDCFLAEGIRVIFKVALVIIGASL--------------------SRHKVRKTCTGLCETLA 298
            :..:.|..|.|||.|||.|||.::..|.                    .|::..:....|.|...
Zfish   748 VFHIIDLLLCEGISVIFNVALSLLKTSKDDLLQTDFEGALKFFRVPVPKRYRSEENAKKLMELAC 812

  Fly   299 VLRSPEEHI--VEEEFIINNMMRLNLRVEDFQIEHTRQKARRAKQKAQQEAESSGSGNGH 356
            .::..::.:  .|:|:   :.:|.....::..||...::.||. |:|....|.......|
Zfish   813 SMKISQKKLKKYEKEY---HTIREQQEQQEAPIERYERENRRL-QEANMRLEQENDDLAH 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 70/207 (34%)
rabgap1XP_073770556.1 None

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