DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and plx

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster


Alignment Length:372 Identity:93/372 - (25%)
Similarity:158/372 - (42%) Gaps:80/372 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LSKAQIIAREKKWLYMIDNWSIYMSKNYKKIRDR---------CRKGIPKSVRPKAWFYLSGAYL 95
            |...:|:..:|:   :|:.|...:.:|..:|.::         .|.|:|:|.|...|.:|:..:.
  Fly   893 LDYEEIVPCDKQ---LIERWEQIIERNSTQIGNKKDPKVLGHAIRTGVPRSKRGDVWTFLAEQHS 954

  Fly    96 LK------KKNPNV---YNELLEKPGNPTTIEEIKKDKH-------RQFPFHEMFLDEQKVGQIE 144
            :.      |:.||.   |:.||         :.:.:.:|       |.||.|:.:.|...:||:.
  Fly   955 MNTAPVDTKRFPNFNTPYHMLL---------KHLTEHQHAIFIDLGRTFPNHQFYKDPLGLGQLS 1010

  Fly   145 LFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVY---LQDYFIPGLEVIQN 206
            |||:||||||.:|::|:||....|...||:|....::|.:...:  ::   ::..::|.::..|.
  Fly  1011 LFNLLKAYSILDPELGYCQGLGFICGVLLLHCDEANSFQLLKHL--MFRRNMRTKYLPDMKKFQL 1073

  Fly   207 DAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFLAEGIRVIFK 271
            ....|..|:|...|.:|..|.::.|.|.||...|.|...:...|...:.||:|....|...||||
  Fly  1074 QLYQLSRLVKDHLPDLYVWLDQNDVSPTLYAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFK 1138

  Fly   272 VALVIIGASLSRH----------------------KVRKTC----------TGLCETLAVLRSPE 304
            .|:    |.||.|                      |:..||          ..:.:.||..: .|
  Fly  1139 FAI----ALLSVHKQQLLAKDNFEEIMDYLKTVVPKMEHTCMEQIMKLVFSMDIGKQLAEYK-VE 1198

  Fly   305 EHIVEEEFIINNMMRLNLRVEDFQIEHTRQKARRAKQK-AQQEAESS 350
            .::::||....|.....|..|..|.:|..|:.:.|:.. ||.|...|
  Fly  1199 YNVLQEEITTTNHHLEMLNREKTQNQHLEQQLQFAQSSIAQLETTRS 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 63/222 (28%)
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 67/233 (29%)
COG4372 <1190..>1353 CDD:443500 16/57 (28%)
Blue background indicates that the domain is not in the aligned region.

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