DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and grtp1a

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_998567.1 Gene:grtp1a / 406711 ZFINID:ZDB-GENE-040426-2733 Length:356 Species:Danio rerio


Alignment Length:265 Identity:88/265 - (33%)
Similarity:133/265 - (50%) Gaps:16/265 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GFQRTD----KPKEPLSK---AQIIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKA 86
            ||||:|    :..|.|..   |.:..|..:|..::.. ...:.:|. |::...|||:|...||..
Zfish    34 GFQRSDDFDYETHEQLMSEYLAVLTRRSIRWAKLLQG-RRRVDRNL-KVKRYVRKGVPNEHRPLV 96

  Fly    87 WFYLSGAYLLKKKNPNVYNELLEKPGNPTTIEEIKKDKHRQFPFHEMF-LDEQKVGQIELFNVLK 150
            |...|||.....:||..|..||:....|...|.|:.|.||.||.:..| ...:...|..|:|||.
Zfish    97 WMVCSGAQEQMDRNPGYYQSLLDTHHEPKLEESIRTDLHRTFPDNIYFRKSAEPCLQQALYNVLV 161

  Fly   151 AYSIYNPKVGFCQAQAPIAAFL-LMHLPAEDAFWVFVSVCDVYLQDYFIPGLEVIQNDAGILEGL 214
            ||..:|..||:||....||.:| |:....|.:||:..::....|.||:.|.:..::.|..:|..|
Zfish   162 AYGHHNKAVGYCQGMNFIAGYLILVSKDEETSFWLMEALLSRILPDYYTPAMLGLKTDQEVLGEL 226

  Fly   215 LKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFLAEGIRVIFKVALVIIGA 279
            ::...|.|::.:|...|...|.::.||:|.....||.||:||:|||...||.:::|:|||.:|  
Zfish   227 VRLKAPAVWKLMQDQGVMWTLVVSRWFICLFIDVLPVETVLRIWDCLFYEGSKILFRVALTLI-- 289

  Fly   280 SLSRH 284
               ||
Zfish   290 ---RH 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 73/205 (36%)
grtp1aNP_998567.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
TBC 84..296 CDD:214540 76/213 (36%)
Blue background indicates that the domain is not in the aligned region.

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