DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and Tbc1d10b

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001102391.1 Gene:Tbc1d10b / 365372 RGDID:1309191 Length:795 Species:Rattus norvegicus


Alignment Length:388 Identity:159/388 - (40%)
Similarity:229/388 - (59%) Gaps:36/388 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LDTISLCS--------TVSSC-------------PDRNGFYGGFQRTDKPKEPLSKAQIIAREKK 51
            ||::||.|        .|||.             .|:.||.||.|.:...:..:.......||.|
  Rat   253 LDSVSLMSGTLESLTDDVSSVGSDSEINGLALRKTDKYGFLGGSQYSGSLESSIPVDVARQRELK 317

  Fly    52 WLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKAWFYLSGAYLLKKKNPNVYNELLEKPGNPTT 116
            ||.|..||..::|:.::|::.|||||||.|:|.|||.|||.:..|.::||..:.||...||:|..
  Rat   318 WLEMFSNWDKWLSRRFQKVKLRCRKGIPSSLRAKAWQYLSNSKELLEQNPGKFEELERAPGDPKW 382

  Fly   117 IEEIKKDKHRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDA 181
            ::.|:||.||||||||||......||.:|:.:||||:||.|..|:||||||:||.||||:|||.|
  Rat   383 LDVIEKDLHRQFPFHEMFAARGGHGQQDLYRILKAYTIYRPDEGYCQAQAPVAAVLLMHMPAEQA 447

  Fly   182 FWVFVSVCDVYLQDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMT 246
            ||..|.:||.||..|:..|||.||.|..|...||::..|..:|||::.:::|:||||:||:|...
  Rat   448 FWCLVQICDKYLPGYYSAGLEAIQLDGEIFFALLRRASPLAHRHLRRQRIDPVLYMTEWFMCIFA 512

  Fly   247 RTLPWETLLRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEE 311
            |||||.::|||||.|..||:::||:||||::..:|...:..::|.|:.||:..||:..:..::|:
  Rat   513 RTLPWASVLRVWDMFFCEGVKIIFRVALVLLRHTLGSVEKLRSCQGMYETMEQLRNLPQQCMQED 577

  Fly   312 FIINNMMRLNLRVEDFQIEHTRQKARRAKQKAQQEAESS--------GSGNGH---RRNMPTL 363
            |:::.:  ..|.|.:..||  |:.|.:.|:..:...|..        ||...|   ||..|.|
  Rat   578 FLVHEV--TTLPVTEALIE--RENAAQLKKWRETRGELQYRPSRRLHGSRAIHEERRRQQPPL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 110/203 (54%)
Tbc1d10bNP_001102391.1 PHA03247 <5..223 CDD:223021
TBC 340..545 CDD:214540 110/204 (54%)
Blue background indicates that the domain is not in the aligned region.

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