DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and tbc-10

DIOPT Version :9

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_497310.2 Gene:tbc-10 / 3564790 WormBaseID:WBGene00019915 Length:445 Species:Caenorhabditis elegans


Alignment Length:323 Identity:136/323 - (42%)
Similarity:198/323 - (61%) Gaps:12/323 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DRNGFYGGFQRTDKPKEPLSKAQIIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKA 86
            ||.||:....:...|  |:....:..|||||:.|:|||..:|.:.::.:::|||||||.|:|.:|
 Worm   121 DRFGFFTIQNKCSTP--PIDSKILRRREKKWIQMLDNWRYFMDEKFELVKNRCRKGIPPSLRGRA 183

  Fly    87 WFYLSGA-YLLK-KKNPNVYNELLEKPGNPTTIEEIKKDKHRQFPFHEMFLDEQKV---GQIELF 146
            |.||||| |.:: ..|..|::..:::.|:|...::|:||..||||.||||....|.   |:.:||
 Worm   184 WKYLSGATYQMEVSSNRFVFDYCVKQAGDPKWNDDIQKDLSRQFPEHEMFARVGKYGNNGKNDLF 248

  Fly   147 NVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVYLQDYFIPGLEVIQNDAGIL 211
            ::|||::|.:|:.|:||.||||||.||||:|..|||:.||.:|..||..|:..|||.:|.|..||
 Worm   249 DLLKAWTILHPEEGYCQGQAPIAAVLLMHMPVRDAFYCFVQICHKYLPGYYSSGLEAVQTDGDIL 313

  Fly   212 EGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFLAEGIRVIFKVALVI 276
            ..|:|......|||.:.:.|:|.|||.:||:|...|||||.|:|||||.||.||::::||||||:
 Worm   314 TKLIKDRSKLTYRHFKANGVDPALYMIEWFMCCFCRTLPWPTVLRVWDMFLCEGVKILFKVALVL 378

  Fly   277 IGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEEFIINNMMRLNLRVEDFQIEH-----TRQ 334
            :...:......|....:...:..||:....|:||||::..:...||...|.:..|     |||
 Worm   379 LKFGIGTPSQIKQYPDMPAIVTRLRNLPVEIMEEEFLVQKISETNLNDADMEKLHFGAMKTRQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 RabGAP-TBC 114..277 CDD:366170 85/165 (52%)
tbc-10NP_497310.2 TBC 171..380 CDD:214540 104/208 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165743
Domainoid 1 1.000 200 1.000 Domainoid score I1775
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I1890
Isobase 1 0.950 - 0 Normalized mean entropy S2353
OMA 1 1.010 - - QHG46720
OrthoDB 1 1.010 - - D309166at33208
OrthoFinder 1 1.000 - - FOG0001498
OrthoInspector 1 1.000 - - oto17404
orthoMCL 1 0.900 - - OOG6_104218
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 1 1.000 - - X1223
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.790

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