DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and Tbc1d2b

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_063121637.1 Gene:Tbc1d2b / 315880 RGDID:1307436 Length:971 Species:Rattus norvegicus


Alignment Length:272 Identity:80/272 - (29%)
Similarity:134/272 - (49%) Gaps:23/272 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YGGFQRTDKPKEPLSKAQIIAREKKWLYMIDN--------WSIYMSKNYKK-------IRDRCRK 76
            ||.....|..:|....|::.|.:.|.||:.:|        |..|.:....:       :::..|.
  Rat   597 YGFRTVPDDDEEEKLVAKVRALDLKTLYLTENQEVSTGVKWENYFASTMNREMVCSPELKNLIRA 661

  Fly    77 GIPKSVRPKAWFYLSGAYLLKKKN---PNVYNELLEK---PGNPTTIEEIKKDKHRQFPFHEMFL 135
            |||...|.|.|.:....:..|.|:   |..:..||:|   ..||.: ::|:.|..|..|.::.:.
  Rat   662 GIPHEHRSKVWKWCVDRHTRKFKDSMEPGYFQALLQKALEKQNPAS-KQIELDLLRTLPNNKHYS 725

  Fly   136 DEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVYL-QDYFIP 199
            .....|..:|.|||.|:|..||.:|:||....:.|..|::|..|||||..|::.:|:: :||:..
  Rat   726 SPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTK 790

  Fly   200 GLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFLAE 264
            .|...|.|..:...||.:..|.::.|.:::||:..|...:|||.....::..:.|.::||.||.|
  Rat   791 TLLGSQVDQRVFRDLLSEKLPRLHTHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYE 855

  Fly   265 GIRVIFKVALVI 276
            |.:|||:.||.:
  Rat   856 GPKVIFRFALAL 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 68/210 (32%)
Tbc1d2bXP_063121637.1 None

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