DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and Tbc1d4

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_001414148.1 Gene:Tbc1d4 / 306117 RGDID:1561609 Length:1300 Species:Rattus norvegicus


Alignment Length:342 Identity:97/342 - (28%)
Similarity:162/342 - (47%) Gaps:31/342 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KAQIIAREKKWLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKAWFYLSGAYLLKKKNPN---- 102
            |..:||.:||.|    |....:..:.:.|....::|:|||.|.:.|.:|:..|.|:.:.||    
  Rat   889 KEVLIAWDKKLL----NCRTKIRCDMEDIHTSLKEGVPKSRRGEIWQFLALQYRLRHRLPNKHQP 949

  Fly   103 ---VYNELLEKPGNPTTIEE--IKKDKHRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFC 162
               .|.|||::    .|.::  |..|..|.||....|..:...||:.|||:|||||:.:.:||:|
  Rat   950 PDTSYKELLKQ----LTAQQHAILVDLGRTFPTQPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYC 1010

  Fly   163 QAQAPIAAFLLMHLPAEDAFWVF-VSVCDVYLQDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHL 226
            |..:.:|..||:|:..|.||.:. ..:.|:..:..:.|.:..:|.....|..||......:|.||
  Rat  1011 QGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRDLYNHL 1075

  Fly   227 QKHKVEPLLYMTDWFLCAMTRTLPWETLLRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCT 291
            :::::.|.||...|||.......|...:.||:|....:|..|||||||.::.   |:..:...|.
  Rat  1076 EENEISPSLYAAPWFLTLFASQFPLGFVARVFDIIFLQGTEVIFKVALSLLS---SQEALVMECE 1137

  Fly   292 GLCETLAVLRS--PEEHIVEEEFIINNMMRLNL--RVEDFQIE-HTRQKARRAKQKAQQEAES-- 349
            .....:..|:|  |:.:..|.|.||..:..:::  ::..:::| |..|........|.::.||  
  Rat  1138 NFENIVEFLKSTLPDMNTTEMEKIITQVFEMDISKQLHAYEVEYHVLQDELLESSYACEDNESLE 1202

  Fly   350 ---SGSGNGHRRNMPTL 363
               ..:....|:||..|
  Rat  1203 KLERANNQLKRQNMDLL 1219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 70/213 (33%)
Tbc1d4NP_001414148.1 None

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