DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and Rabgap1l

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_063128419.1 Gene:Rabgap1l / 304914 RGDID:1304620 Length:1066 Species:Rattus norvegicus


Alignment Length:322 Identity:87/322 - (27%)
Similarity:147/322 - (45%) Gaps:34/322 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 WLYMIDNWSIYMSKNYKKIRDRCRKGIPKSVRPKAWFYLSGAY----LLKKKNPNVYNELLEKPG 112
            |..::..|...::...|.:....:.|:|:::|.:.|..|:|.:    :|.|     |..|:.|..
  Rat   528 WGELLGRWHNNLNARPKGLPTLVKSGVPEALRAEVWQLLAGCHDNQAMLDK-----YRILITKDS 587

  Fly   113 NPTTIEEIKKDKHRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLP 177
            ...::  |.:|.||.||.|:.|.|....||..|:.:.||||:|:..:|:||.|:.:||.||:|:|
  Rat   588 AQESV--ITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHMP 650

  Fly   178 AEDAFWVFVSVCDVY-LQDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWF 241
            .|.||.|.|::...| |:|.:....|.:......||.|:::..|.:|.|.....:|..:|.:.||
  Rat   651 EEQAFCVLVNIMYKYKLRDLYKNNFEDLHCKFYQLEKLMQEQLPDLYSHFCDLNLEAHMYASQWF 715

  Fly   242 LCAMTRTLPWETLLRVWDCFLAEGIRVIFKVALVIIGASL--------------------SRHKV 286
            |...|...|...:..:.|..|.||:.:||.|||.::..|.                    .|::.
  Rat   716 LTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRA 780

  Fly   287 RKTCTGLCETLAVLRSPEEHIVEEEFIINNMMRLNLRVEDFQIEHTRQKAR--RAKQKAQQE 346
            .:....|.|....::.|.:.:.:.|.....|....|:.||....:.|:..|  .|..:.:||
  Rat   781 EENARRLMEQACNIKVPTKKLKKYEKEYQAMRENQLQQEDPMDRYKRENRRLQEASMRLEQE 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 69/208 (33%)
Rabgap1lXP_063128419.1 None

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