DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and TBC1D9B

DIOPT Version :9

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:NP_942568.2 Gene:TBC1D9B / 23061 HGNCID:29097 Length:1250 Species:Homo sapiens


Alignment Length:385 Identity:110/385 - (28%)
Similarity:179/385 - (46%) Gaps:64/385 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LCSTVSSCPDR-----NGFYGGFQRTDKPKEPLSKAQIIAREKKWLYMIDNWSIYMSK------N 66
            |.|..|.|...     .|....||: :.|.|.|.     |:..|.....::|.|:..:      .
Human   437 LSSRQSFCAQEAPTASQGLLKLFQK-NSPMEDLG-----AKGAKEKMKEESWHIHFFEYGRGVCM 495

  Fly    67 YK--KIRDRCRKGIPKSVRPKAWFYLSGAYLLKKKNPNVYNELLEKPGNPTTI--EEIKKDKHRQ 127
            |:  |.|....||||:|:|.:.|...|||:.....:|..|.||:||.....::  |||::|.||.
Human   496 YRTAKTRALVLKGIPESLRGELWLLFSGAWNEMVTHPGYYAELVEKSTGKYSLATEEIERDLHRS 560

  Fly   128 FPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVY 192
            .|.|..|.:|  :|...|..||.||:..||.:|:|||...:.:.||::...|:|||:.|::|:..
Human   561 MPEHPAFQNE--LGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLYGSEEEAFWLLVALCERM 623

  Fly   193 LQDYF---IPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWETL 254
            |.||:   :.|..|   |.||.|.|.:...|.:...:|...|...:.:: |||......:|:|:.
Human   624 LPDYYNTRVVGALV---DQGIFEELTRDFLPQLSEKMQDLGVISSISLS-WFLTLFLSVMPFESA 684

  Fly   255 LRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEEFI------ 313
            :.:.|||..|||:||.:|||.::.|::.:   ...|:...|.:.:|....:::|.::.:      
Human   685 VVIVDCFFYEGIKVILQVALAVLDANMEQ---LLGCSDEGEAMTMLGRYLDNVVNKQSVSPPIPH 746

  Fly   314 ----------------INNMMRL------NLRVEDFQIEHTRQKAR-RAKQKAQQEAESS 350
                            |..::::      :||.||  ||..|.|.| :..|..:..|:.|
Human   747 LRALLSSSDDPPAEVDIFELLKVSYEKFSSLRAED--IEQMRFKQRLKVIQSLEDTAKRS 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 RabGAP-TBC 114..277 CDD:366170 59/167 (35%)
TBC1D9BNP_942568.2 PH-GRAM1_TCB1D9_TCB1D9B 153..251 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 299..394 CDD:270161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..443 2/5 (40%)
TBC 505..715 CDD:214540 76/218 (35%)
EFh <855..906 CDD:298682
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..999
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1069..1093
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1128..1157
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R540
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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