DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wkd and sgsm1b

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_073770421.1 Gene:sgsm1b / 100535556 ZFINID:ZDB-GENE-091117-39 Length:1497 Species:Danio rerio


Alignment Length:244 Identity:48/244 - (19%)
Similarity:86/244 - (35%) Gaps:75/244 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 FLDEQKVGQIELFNVLKAYSIYNPK---VGFCQAQAPIAAFL---LMHLPAEDAFWVFVSVCDVY 192
            |:.|.....|....|::|..::..|   .||.::....|.|:   .|..||||       :|.. 
Zfish    30 FVHEDSSHIISFCGVVEACVLHGLKRRAAGFLRSNKLAALFMKVGKMFPPAED-------LCRK- 86

  Fly   193 LQDYFIPGLEVI----QNDAGI-LEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWE 252
                 :..||.|    ||.:.: .|.:.|:..||        .:.||.....|...|:|:     
Zfish    87 -----VQELEQIIENKQNQSQMSQESVRKQPRPP--------NLSPLAIKHLWIRTALTQ----- 133

  Fly   253 TLLRVWDCFLAEGIRVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEHIVEEEFIINNM 317
                          :::.|:.|.::          :..:...|..|:||.|          ::..
Zfish   134 --------------KLLDKIVLYLV----------ENSSKFYEREALLRDP----------VDGP 164

  Fly   318 MRLNLRVEDFQIEHTRQKARR---AKQKAQQEAESSGSGNGH-RRNMPT 362
            :..:|.|....:|:|:.|...   ....|.:..:.....:|| |::.||
Zfish   165 ILASLLVGPCALEYTKAKTANHFWTDPSADELVQRHRIHSGHCRQDSPT 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 32/154 (21%)
sgsm1bXP_073770421.1 None

Return to query results.
Submit another query.