DRSC/TRiP Functional Genomics Resources

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Protein Alignment wkd and sgsm2

DIOPT Version :10

Sequence 1:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster
Sequence 2:XP_002935339.2 Gene:sgsm2 / 100494226 XenbaseID:XB-GENE-6050632 Length:1058 Species:Xenopus tropicalis


Alignment Length:260 Identity:49/260 - (18%)
Similarity:81/260 - (31%) Gaps:86/260 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 YLSGAYLLKKKNPNVYN-ELLEKPGNPTTIEEIKKDKHRQFPFHEMFLDEQKVGQIELFNVLKAY 152
            ||:.|..:....|..|. |||:...  ..:..|.||..|....:..|.||...   :|.|::.:|
 Frog   819 YLNTAEDISSMCPTSYTIELLDTIA--LNLHRIDKDVQRCDRNYWYFTDENLE---KLRNIMCSY 878

  Fly   153 SIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVCDVYLQDYFIPGLEVIQNDAGILEGLLKK 217
            ...:..:|:.|                       .:||:     ..|.:.|:.||      ||..
 Frog   879 VWEHLDIGYVQ-----------------------GMCDL-----LAPLMVVLDND------LLAY 909

  Fly   218 TCPPVYRHLQKH----------------KVEPLLYMTD---------------------WFLCAM 245
            :|   :..|.|.                .:..|:.:.|                     |||...
 Frog   910 SC---FTQLMKRMSQNFPNGGAMDTHFANMRSLIQILDSELFELMHQNGDYTHFYFCYRWFLLDF 971

  Fly   246 TRTLPWETLLRVWDCFLAEGI----RVIFKVALVIIGASLSRHKVRKTCTGLCETLAVLRSPEEH 306
            .|.|.:|.:..||:...|..:    ..:..:||.::  .:.|..||.......:.:.......||
 Frog   972 KRELLYEDVFAVWEVIWAARLISSEHFVLFIALALV--EVYREIVRDNNMDFTDIIKFFNEMAEH 1034

  Fly   307  306
             Frog  1035  1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wkdNP_650089.1 TBC 74..278 CDD:214540 44/230 (19%)
sgsm2XP_002935339.2 RUN_SGSM2 18..197 CDD:439066
PH_RUTBC 256..427 CDD:275431
TBC <846..1013 CDD:214540 37/208 (18%)
Blue background indicates that the domain is not in the aligned region.

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