DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5342 and AT5G17250

DIOPT Version :10

Sequence 1:NP_650088.2 Gene:CG5342 / 41389 FlyBaseID:FBgn0037916 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_001318581.1 Gene:AT5G17250 / 831589 AraportID:AT5G17250 Length:946 Species:Arabidopsis thaliana


Alignment Length:8 Identity:3/8 - (37%)
Similarity:5/8 - (62%) Gaps:0/8 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 RSTTPPHW 323
            ::...|||
plant   123 KAAVVPHW 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5342NP_650088.2 GPI_EPT_1 43..318 CDD:293744 0/1 (0%)
PigN 397..781 CDD:461508
AT5G17250NP_001318581.1 GPI_EPT_3 76..375 CDD:293747 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.

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