DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5342 and CG6790

DIOPT Version :9

Sequence 1:NP_650088.2 Gene:CG5342 / 41389 FlyBaseID:FBgn0037916 Length:837 Species:Drosophila melanogaster
Sequence 2:NP_650087.2 Gene:CG6790 / 41388 FlyBaseID:FBgn0037915 Length:897 Species:Drosophila melanogaster


Alignment Length:922 Identity:235/922 - (25%)
Similarity:384/922 - (41%) Gaps:219/922 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLFQLLLLFAVVLIYLRSTYPGSLEPQE-VEHLKEPPPADRLVVLVRDGLSAQSFLANRCTNVPL 72
            ||..||||..::.|:.:|.....||||: :..:..||.||||||.:.:||.|.:..::.|:....
  Fly    48 VLVHLLLLICIMRIFYQSGPLSQLEPQKTLLDMGVPPAADRLVVFLLEGLRADTLFSDNCSGAVY 112

  Fly    73 LRELFLHQGLVGISRPETITYHSISPYISLFSGFNEDAASVARGWLGTPAS-IDSIFDRC----K 132
            :|::.|.|||||||:....|. :.|..::||:|||...:.:       |.| .|:||:|.    |
  Fly   113 IRDIILRQGLVGISKTSVPTL-TRSAEVALFAGFNPMPSIL-------PTSNFDTIFNRTLAFDK 169

  Fly   133 RSFAWTTTELISRFPKI-ERPRELSFETYGEGVTKSCSEMEDFVCRSVQRF----LGGGSRLLLN 192
            .:|.        ||..: :..|.|:        .::|.|...:..:.|...    :||.|.|   
  Fly   170 GAFL--------RFSHLSDLRRRLT--------KRACLEKLWYANKLVMLVNLAEVGGASPL--- 215

  Fly   193 TTGVIFFIHMTGVEPSCESLQRIQENVWNVYKSFEKTFPDQRTAYLFTSNLG-----------DP 246
            ..|....:|.|            |.|:.:.|:..|.||.|.:||||:||..|           |.
  Fly   216 DIGFQMKLHNT------------QRNIRDAYELIEATFNDSKTAYLYTSAHGLTYFGSHGGGSDE 268

  Fly   247 QTKSEYSLAVESPFFLWGSGVNHIKSMPGRSFMANEAGLRLPLHVLNTPHLTALMSALLGVPPPV 311
            :.        |:||.|||:||.|:.......|:.|. |:.:.||.|:...|..|||||:|:||||
  Fly   269 ER--------EAPFLLWGAGVKHVTENITSDFVLNN-GVGMQLHKLDQIQLAPLMSALIGLPPPV 324

  Fly   312 YSRGMLPKGMLNASLRYEANAMLINAKQLLAQARRLRELHPKRMPAFWLS------------FQ- 363
            .:..:||:|.:..|..|...::.:||.|||.||:.:..||.:.:...||.            :| 
  Fly   325 NNLAILPQGYMKVSREYARKSVHLNALQLLTQAKAIIRLHERGVFHKWLPKDKDLDLQQIAYYQN 389

  Fly   364 MMDNFVKESLALKKQRRFRALLDYSCNYMPVLIKGMDYFKDYYRHVSITAVSFAGIAWIYCLRCH 428
            .||:.:......|       .|:.|...:.|.:|.:.::.:||....:.....|.:.|.:     
  Fly   390 QMDHLLDMGWRSK-------ALETSTLAIKVALKSLKFYHNYYHIPLVVTTVLALLGWQF----- 442

  Fly   429 LTVGKKCRNLIEIQEVISSKRLVYARGFHR----------LLTGVLVIIMMLERIPLVVQAILLI 483
                   ..|:::.:.:.:...: .||:..          ||.|.:|   .|:..|.:....|::
  Fly   443 -------YQLVKLSQNVMAPHYM-RRGYLTWCTIFLASLGLLLGEMV---FLQWAPFMTVICLVV 496

  Fly   484 PSLYWRTTLKILGER----------------PKMVCRKSLMSTALLALICFGGFFRRYILAVGYL 532
            |...|..||..|.:.                |..|...|:.....|:|        .|||.||:.
  Fly   497 PFGVWCMTLAALPQNGGWIFEPLKHLRWIVGPAAVMIASIYCNCPLSL--------AYILCVGFY 553

  Fly   533 GFASYNNREAFKRRGHQFYLW--LLLLLGLTVVSALPESLGCSQPG--ALM----------FSIF 583
                  ||..:.....:|..|  |:||||         ....||.|  .||          .|:.
  Fly   554 ------NRRGWLHPSPKFLAWLALVLLLG---------GFLWSQKGMQILMTTNYRVVLQAISML 603

  Fly   584 LTVLRPLACGVYLNLLTWLSNIPVLLAALEYILIGWH----PWIMYLVSWIYLGFL---VLWQRR 641
            :.::||...........|:.|..:|..|...|.:...    |..::..:|.||.:.   |....|
  Fly   604 VVIVRPCVLNENHKWKVWVINGGILFVAAIGIFLKEMGKPVPLYLFAANWAYLIYAFASVPCSSR 668

  Fly   642 NLQAS--EVFFFDLSTLYTLTCTSYESVVIQMLAMELQLALRM--KLKR-NESIGPKTAAHY--- 698
            ....|  |:..|:|.||:.|...||.|:..|.|.:|.|:.|.:  |.|. :|.:...|::.:   
  Fly   669 TTPQSRLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEADEDVKILTSSKHLQM 733

  Fly   699 -------ILVYSWYSLFIIGSFPAFDDFLD-----ILHETCFGYSPLTYGLVMVLKLILPWLLVL 751
                   ||:|.:.|||..|.:.....:|.     .|.::..|..|    |::::.|::|.::::
  Fly   734 CYRFAVSILLYFYASLFGTGHWVGGFTYLANSARLFLPDSSSGLVP----LLVLIHLLIPSIVIM 794

  Fly   752 CIMAGNYKSLASYEQQ----IFVRLLLMNSAMSLVLLHGITNVGPWRDILSRFAEFAVVHVFPLV 812
            ..:.    :|:|:.:|    ||..|:|:.:|:.|..:..:.:...|     ..|..:|||.    
  Fly   795 ASVV----ALSSFGRQQIRTIFSSLMLICNAVVLFFVVFVPHNAYW-----PMAHPSVVHA---- 846

  Fly   813 WLLLWRLTQLKV 824
              ||.:||.:.:
  Fly   847 --LLAQLTVILI 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5342NP_650088.2 GPI_EPT_1 43..318 CDD:293744 91/295 (31%)
PigN 398..781 CDD:282796 98/453 (22%)
CG6790NP_650087.2 GPI_EPT_1 83..331 CDD:293744 91/295 (31%)
PigN 418..821 CDD:282796 97/449 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470301
Domainoid 1 1.000 119 1.000 Domainoid score I1899
eggNOG 1 0.900 - - E1_COG1524
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1579
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141925at33208
OrthoFinder 1 1.000 - - FOG0014321
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12250
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.800

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