DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6790 and MCD4

DIOPT Version :10

Sequence 1:NP_650087.2 Gene:CG6790 / 41388 FlyBaseID:FBgn0037915 Length:897 Species:Drosophila melanogaster
Sequence 2:NP_012756.1 Gene:MCD4 / 853690 SGDID:S000001648 Length:919 Species:Saccharomyces cerevisiae


Alignment Length:981 Identity:212/981 - (21%)
Similarity:382/981 - (38%) Gaps:243/981 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VLVHLLLLICIMRIFYQSGPLSQLEPQKTLLDMGVP-PAADRLVVFLLEGLRADTLF---SDNCS 108
            ||.||..|..|..|::.|..:..:.|.::     .| |.|.||.:.:.:||||||.|   :...|
Yeast    14 VLFHLFYLWSIFDIYFISPLVHGMSPYQS-----TPTPPAKRLFLIVGDGLRADTTFDKVTHPVS 73

  Fly   109 G-----AVYIRDIILRQGLVGISKTSVPTLTRSAEVALFAGF-------------NPMPSILPTS 155
            |     |.:||.:::.....|||.|.:||.:|...||:.|||             ||:       
Yeast    74 GKTEFLAPFIRSLVMNNATYGISHTRMPTESRPGHVAMIAGFYEDVSAVTKGWKSNPV------- 131

  Fly   156 NFDTIFNR---TLAF------------------------------------DKGAFLRFSHLSDL 181
            |||:.||:   |.:|                                    :..||: |.||..|
Yeast   132 NFDSFFNQSTHTYSFGSPDILPMFKDGASDPNKVDTWMYDHTFEDFTQSSIELDAFV-FRHLDQL 195

  Fly   182 RRRLTKRACLEKLWYANKLVMLVNLAEVGGASPLDIGFQMKLHNTQRNIRDAYEL----IEATFN 242
            ....|..:.|:.....:..|..::|.....|......:..:.::..:.|.|...:    :...|.
Yeast   196 FHNSTLNSTLDYEIRQDGNVFFLHLLGCDTAGHSYRPYSAEYYDNVKYIDDQIPILIDKVNKFFA 260

  Fly   243 DSKTAYLYTSAHGLTYFGSHGGGSDEEREAPFLLWGAGVKH-------VTENITSDFVLNNGVGM 300
            |.|||:::|:.||::.|||||.|.......|.:.||||:..       |::|.|.::.|::   :
Yeast   261 DDKTAFIFTADHGMSAFGSHGDGHPNNTRTPLVAWGAGLNKPVHNPFPVSDNYTENWELSS---I 322

  Fly   301 QLHKLDQIQLAPLMSALIGLPPPVNNLAILPQGYMKVSREYARKSVHLNALQLLTQ--------- 356
            :.:.:.|..:|.|||.|||:..|.|::..||..|:.........:::.||..:|.|         
Yeast   323 KRNDVKQADIASLMSYLIGVNYPKNSVGELPIAYIDGKESDKLAALYNNARSILEQYLVKQDEVI 387

  Fly   357 -----AKAIIRLHERGVFHKWLPKDKDLDLQQIAYYQNQMDHLLDMGWRSKALETSTLAIKVALK 416
                 .|...:..|:...| :|.:.:.| :|:|:..:|.::        .:|:..:...:::.|:
Yeast   388 DSQFFYKEYFKFVEKSHSH-YLEEIETL-IQRISEGENYLE--------QEAITLTEELMQITLE 442

  Fly   417 SLKFY--HNYYHIPLVVTTVLALLGWQFYQLV-----KLSQNVM-----AP--HYMRRGYLTWCT 467
            .|.:.  :|:..|..:||  ...:||.|:..:     .:.:||:     :|  |          .
Yeast   443 GLHYLTTYNWRFIRTIVT--FGFVGWIFFSFIIFLKSFILENVIDDQKASPLSH----------A 495

  Fly   468 IFLASLGLLLGEMVFLQWAPFMTVICLVVPFGVWCMTLAALPQNGGWIFEPLKHLR--------- 523
            :| .|:|:||..::|.|.:||...:.|:.|...|           .:||.....||         
Yeast   496 VF-GSIGILLNWILFYQHSPFNFYMYLLFPLYFW-----------SYIFTNRSVLRSGIKEFFKG 548

  Fly   524 ---WIVGPAAVMIASIYCNCPLSLAYILCVGFYNRRGW----------LHP--------SPKFLA 567
               |......:.|.|:|    ..:.|    ||::|  |          .:|        |...| 
Yeast   549 TSPWKRVLITISIISVY----EGIVY----GFFHR--WTFTLITNILAFYPFICGVRELSVNIL- 602

  Fly   568 WLALVLLLGGFLWSQ------------KGMQILMTTNYRV---------VLQAISMLVVIVRPCV 611
            |:...:||..|....            .|:.|:::..|.:         ..:||..:.:.:...:
Yeast   603 WIITSVLLSTFTLFDAVKIEDLNQIHLAGLLIILSAFYALYKIHSRINSYTRAIFAIQISLVAAM 667

  Fly   612 LNENHKWKVWVINGGILFVAAIGIFLKEMGKPVPLYLFAANWAYLIYAFASVPCSSRTTPQS--- 673
            |...|:             :.|.:.|::   .:|.....|.|.....:...:|......|.:   
Yeast   668 LAVTHR-------------SVISLQLRQ---GLPRESQVAGWIIFFVSLFVMPILHYRKPNNDYK 716

  Fly   674 -RLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQM-GLEVHEKFKEADEDVKILTSSKHLQMCYR 736
             ||.:|........::|:.|:.||| ..|...|.: .:|:..|.||    :|.......||:   
Yeast   717 VRLLIIYLTFAPSFIILTISFESLF-YFLFTSYMVQWIEIENKIKE----MKTQKDENWLQV--- 773

  Fly   737 FAVSILLYF--YASLFGTGHWVGGFTYLANSARLFLPDSSSGLVPLLVLIHLLIPSIVIMASVVA 799
            ..||::.:|  ..:.||||:.....::...|....||.....|:..|:::.|:||..::...:..
Yeast   774 LRVSVIGFFLLQVAFFGTGNVASISSFSLESVCRLLPIFDPFLMGALLMLKLIIPYGLLSTCLGI 838

  Fly   800 LSSFGRQQIRTIFSSLMLICNAVVLFFVVFVPHNAYWPMAHPSVVHALLAQLTVILILACESIVT 864
            |:.....:..||.|.::.:.:.:.|.|...:.....|.....::.:..||.|:.:.:|..|.:..
Yeast   839 LNLKLNFKDYTISSLIISMSDILSLNFFYLLRTEGSWLDIGITISNYCLAILSSLFMLILEVLGH 903

  Fly   865 IFFRRL 870
            :..:.:
Yeast   904 VLLKNV 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6790NP_650087.2 GPI_EPT_1 83..331 CDD:293744 84/319 (26%)
PigN 418..821 CDD:461508 94/474 (20%)
MCD4NP_012756.1 GPI_EPT_1 46..353 CDD:293744 83/317 (26%)
PigN 442..874 CDD:461508 96/490 (20%)

Return to query results.
Submit another query.