DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6790 and its8

DIOPT Version :10

Sequence 1:NP_650087.2 Gene:CG6790 / 41388 FlyBaseID:FBgn0037915 Length:897 Species:Drosophila melanogaster
Sequence 2:NP_595248.1 Gene:its8 / 2541199 PomBaseID:SPBC839.08C Length:935 Species:Schizosaccharomyces pombe


Alignment Length:1002 Identity:217/1002 - (21%)
Similarity:379/1002 - (37%) Gaps:254/1002 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VLVHLLLLICIMRIFYQSGPLSQLEPQKTLLDMGVPPAADRLVVFLLEGLRADTLF---SDNCSG 109
            :|.|::.|..|..|::.: ||.....|   ...|..| |.||.:.:.:|||.|.|.   |:...|
pombe    10 ILFHVVFLKSIFDIYFVT-PLIHGMKQ---YSAGEAP-AKRLFLIVGDGLRPDKLLQPHSEKVIG 69

  Fly   110 ------AVYIRDIILRQGLVGISKTSVPTLTRSAEVALFAGF-------------NPMPSILPTS 155
                  |.::|.||...|..|:|.|.|||.:|...|||.|||             ||:       
pombe    70 EEQTYAAPFLRSIIQNNGTFGVSHTRVPTESRPGHVALIAGFYEDVSAVTKGWKKNPV------- 127

  Fly   156 NFDTIFNRTL------------AFDKGA--------FLRFSHLSD---------------LRRRL 185
            |||::||::.            .|.:||        |:..|.|.|               |...|
pombe   128 NFDSVFNQSRHTYSFGSEDILPMFSEGASDPSRVDTFMYSSELEDFSSNGIVLDEWVFDRLDELL 192

  Fly   186 TKRACLEKLW---YANKLVMLVNLAEVG----GASPLDIGFQMKLHNTQRNIRDAYELIEATF-N 242
            .:....::||   :.:|:|..::|..:.    ...|..:.:...:......|::..:.:...: |
pombe   193 AQSLEDKELWDMLHRDKIVFFLHLLGIDTIGHNKHPDSVEYVENIQYIDGKIQELVDKMNNYYNN 257

  Fly   243 DSKTAYLYTSAHGLTYFGSHGGGSDEEREAPFLLWGAGVKHVTE-------------NITSDFVL 294
            |..:::::|:.||::.|||||.|:.:....|.:.||||::..|.             |:|     
pombe   258 DGASSWVFTADHGMSDFGSHGDGNLDNTRTPIIAWGAGIQSPTHEKNYGHDEYSLPWNLT----- 317

  Fly   295 NNGVGMQLHKLD--QIQLAPLMSALIGLPPPVNNLAILPQGYMKVSREYARKSVHLNALQLLTQ- 356
                  ::.::|  |..:|.|||.|:||..|||::..:|..|:..|.....:...:|||::..| 
pombe   318 ------EIKRIDIQQADIAALMSYLVGLNFPVNSVGQIPLDYLDCSSRRKAEVALMNALEIGEQY 376

  Fly   357 -AKAIIRLHERGVFHKWLPKDKDLDLQQIAYYQNQMDHLLDMGWRSKALETSTLAIKVALKSLKF 420
             .|:..:......|..:.|.....::|  |.:.|.:...::.|....|:|......:..|..|::
pombe   377 NLKSASKDQTSIFFRPYSPLRNYTEVQ--ASFYNSVIADIESGEYEIAIEHCFHFSQTVLSGLRY 439

  Fly   421 YHNYYHIPLVVTTVLALLGWQFYQL-------VKLSQNVMAP-HYMRR-----GYLTWCTIFLAS 472
            ...|..:.|........|.|..|.:       ::.|..::.| ..::|     .:|..|..|...
pombe   440 LQRYDWLLLRSIVFFGYLSWIGYVICFVFSLNIEPSSKIVKPVSVVKRVAFNIPFLLICIFFYIQ 504

  Fly   473 ------LGLLLGEMVFLQWAPFMTVICLVVP---FGVWCMTLAALPQNGGWIFEPLKHLRWIVGP 528
                  .|..|...:|||      :|..:.|   .|.......|..::|   |..||        
pombe   505 SSPPFYYGYALFPTIFLQ------LIHSIFPNTKLGFKNFLTVAKQKHG---FSLLK-------- 552

  Fly   529 AAVMIASIYCNCPLSLAYILCVGFYNRRG------------W-LHPSPKF------LAWLALVLL 574
              ::..|:   |.|.|...:...:::|.|            | ||....|      ::|..|..|
pombe   553 --ILFISL---CILCLLQFIVYSYFHREGFSVILMGLAAWPWLLHADYAFSHKTISVSWSVLTSL 612

  Fly   575 L-------------------GGFLWSQKGMQILM------------TTNYRVVLQAISMLVVIVR 608
            |                   |||..|..|:..::            .||.::|||.:.::..:  
pombe   613 LCFFTILPVNKKESLLFIFAGGFAMSVAGVFYILYRRNQAFQYSSTVTNKQLVLQVLIIMATV-- 675

  Fly   609 PCVLNENHKWKVWVINGGILFVAAIGIFLKEMGKPVP-----LYLFAANWAYLIYAFASVPCSSR 668
            |..|......:..:....||.:.|.|:|:.....|..     .:.|....|.|...|:...|   
pombe   676 PVTLKIADSLQRNIAIPPILRLVAFGLFITSYIIPSHHIRSCKHYFLDRLAILFLTFSPTMC--- 737

  Fly   669 TTPQSRLELIRFNLLTLHVLLSDSYVSLFAQGLIIEYQMGLEVHEKFKEADEDVKILTSSK---- 729
                               :||.|:.:||...|.|...:.:|:..:.::..|.:....|.|    
pombe   738 -------------------MLSISFEALFYVVLFITLGLWMELETELQKYTEQLHPEYSRKKDAK 783

  Fly   730 -HLQMCYRFAVSILLYFY----ASLFGTGHWVGGFTYLANSARLFLPDSSSGLVPLLVLIHLLIP 789
             ||.:.:   :.|.|:||    .:.||||:.....|:..:|.:.|:|..:......|::..:|:|
pombe   784 FHLSLSH---IRISLFFYIFINVAFFGTGNVASLSTFALDSVKRFIPVFNPVTQGALLMYTILVP 845

  Fly   790 SIVIMASVVALSS--FGRQQIRTIFSSLMLICNAVVLFFVVFVPHNAYWPMAHPSVVHALLAQLT 852
            .|.:.|:...::.  .|.||: |.|.::.: .:.|.:.|...|.....|.....|:.|..::...
pombe   846 FIALSAAFGIMNKRLGGIQQV-TFFLAVGM-ADIVTINFFYLVKDEGSWKDIGVSISHFCISNFL 908

  Fly   853 VILILA--------CESIVTIFFRRLN 871
            ::.|.|        |::|......::|
pombe   909 ILFITALEHASAILCKNITYTIHEKVN 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6790NP_650087.2 GPI_EPT_1 83..331 CDD:293744 83/327 (25%)
PigN 418..821 CDD:461508 97/490 (20%)
its8NP_595248.1 GPI_EPT_1 40..350 CDD:293744 83/328 (25%)
PigN 436..891 CDD:461508 100/505 (20%)

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