DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6790 and pigo-1

DIOPT Version :9

Sequence 1:NP_650087.2 Gene:CG6790 / 41388 FlyBaseID:FBgn0037915 Length:897 Species:Drosophila melanogaster
Sequence 2:NP_491750.3 Gene:pigo-1 / 172285 WormBaseID:WBGene00016159 Length:883 Species:Caenorhabditis elegans


Alignment Length:955 Identity:182/955 - (19%)
Similarity:333/955 - (34%) Gaps:306/955 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KVVLVHLLLLICIMRIFYQSGPL---SQLEPQKTLLDMGVPPAA--------DRLVVFLLEGLRA 99
            :::||.:.:|:.:  ..:|:|.|   .::..:.:..|....|..        .|:::.|::.||.
 Worm     6 RILLVSINILLAL--FIFQNGFLLKRQEILSKSSCSDAHAQPGQTCWMKQQYQRVILILVDALRY 68

  Fly   100 DTL--FSDNCSGAV---YIR------DIILRQGLVGISK--TSVPTLTRSAEVALFAGFNPMPSI 151
            |.|  ..:|...:.   |.|      :.:::.|.|.|..  ...||.|.....||..|      .
 Worm    69 DFLIPIDENTKKSKEEWYYRGQMKNIEKLVKSGNVSIGTLLADPPTTTLQRLKALTTG------T 127

  Fly   152 LPT---------------------------------------SNFDTIFNRTLAFDKGAFLRFSH 177
            |||                                       |.|...|::|.|:|.      ..
 Worm   128 LPTFIDAGDNFSPDAVISEDSFVYQAAQLGKNVTLLGDDTWLSLFPNQFSKTAAYDS------FD 186

  Fly   178 LSDLRRRLTKRACL--EKLWYANKLVMLVNLAEV-------GGASPLDIGFQMKLHNTQRNI-RD 232
            ::||.....|.|.:  :::..:|..:::.:...|       |.:.|:       :.:|.|.: |.
 Worm   187 INDLNTVDDKIAPILQDEMLNSNSSIIIAHFLGVDHCGHKFGPSHPV-------MADTLRKMDRI 244

  Fly   233 AYELIEATFNDSKTAYLYTSAHGLTYFGSHGGGSDEEREAPFLLWGAGVKHVTENITSDFVLNNG 297
            ..:.||...:|.         ||:|..|.|||.|:.|..|..|:...  ||       ..:|.. 
 Worm   245 IGQTIETMKSDD---------HGMTSTGDHGGESENEIRAGILVHSK--KH-------QIILPE- 290

  Fly   298 VGMQLHKLDQIQLAPLMSALIGLPPPVNNL-AILPQGYMKVSREYARKSVHLNALQLLTQAKAII 361
                 ..:.||.:.|.:|.|:|||.|.:|| .::.|.:   :|:....:|.:|..|:...|:...
 Worm   291 -----RPIHQIDIVPTISLLMGLPIPFSNLGTVITQLF---TRDLWEIAVGMNYEQVKRFAETYA 347

  Fly   362 RLHERGVFHKWLPKDKDLDLQQIAYYQNQMDHLLDMGWRSKALETSTLAIKVALKSLKFYHNYYH 426
            .....|..|....:|           .|.|:..||...|                          
 Worm   348 AQKNFGELHSHTIRD-----------SNTMEEQLDTMSR-------------------------- 375

  Fly   427 IPLVVTTVLALLGWQFYQLVKLSQNVMAPHYMRRGYLTWCTIFLASLGLLLGEMVFLQWAPFMTV 491
                :.|:|.:...||...           |:..|..   ::..|.:.|:..|::.|:|..:.| 
 Worm   376 ----IQTLLRVSWTQFDDA-----------YINAGIF---SLVEAIMFLITNEVMSLEWIIYRT- 421

  Fly   492 ICLVVPFGVWCMTLAAL---PQNGGWIFEPLKHLRWIVGPAAVMIASIYCNCPLSLAYILCVGFY 553
                   |...:..|.|   ..:.|             ....:::.::..:| ||....:|    
 Worm   422 -------GCGLLQAALLTDKTDSDG-------------SARTLLLMTLAVSC-LSSIISMC---- 461

  Fly   554 NRRGWLHPSPKFLAWLALVLLLGGFLWSQKGMQILMTTNYRVVLQAISMLVVIVRPCVLNENH-- 616
                                        .|.:||.::....:..:.|..::||:....|..|.  
 Worm   462 ----------------------------HKALQIRISIKSMLSAKVIGPILVIIHSISLFSNSYV 498

  Fly   617 KWKVWVINGGILFVAAIGIFLKEMGKPV--PLYLFAAN--WAYL-----IYAFASVPCSSRTTP- 671
            .::..|:...:..:..: :||:::....  |...|..|  |.::     :..|..:....|:.| 
 Worm   499 VYEAQVVRYFLQSLVTL-VFLEKLRSTALRPRKPFKLNFLWKFVNQDQNLIIFTLIMVGLRSEPI 562

  Fly   672 --QSRLELIRFNLLTLH------VLLSDSYV--SLFAQG------LIIEYQMGL-----EVHEKF 715
              :.|.|.:..:  |.:      .|..|:.|  .|||.|      |.:....||     ::....
 Worm   563 FHRCREEEVGCD--TYYPSRQAGSLTRDAQVVRLLFALGSLAVANLSVFKYYGLRDTKSQIESNS 625

  Fly   716 KEADEDVKILTSSKHLQMCYRFAVSILLYFYASLFGTGHWVGGFTYLANS--------ARLFLPD 772
            |.:.|.::||:::..|.:    |:.:|...:|||   .|.|......|:|        |.|...:
 Worm   626 KRSSETIRILSATSWLHI----AIIVLHSVFASL---THDVSRANLSAHSLSVISLICAVLAWRE 683

  Fly   773 SSSG------LVPLLVLI-HLLIPSIVIMASV-VALSSFGRQQIRTIFSSLMLICNAVVLFF--- 826
            .:|.      |:|:.:|. ..|||:|:|..:| |.::.|..::.  |.|::.|:   :.|.|   
 Worm   684 GNSAICAHFLLMPVYILFGDGLIPAIIIFIAVSVLIAEFVSREF--IASTIALL---IPLGFYHL 743

  Fly   827 -----VVFVPHNAYWPMAHPSVVHALLAQLTVILILACESIVTIF 866
                 :..:|.||.:..........:|..|.|:..|...:|.:||
 Worm   744 GHSPVISSIPWNAAFVGIPGGTALRVLPALFVLFHLNFSAISSIF 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6790NP_650087.2 GPI_EPT_1 83..331 CDD:293744 67/318 (21%)
PigN 418..821 CDD:282796 82/454 (18%)
pigo-1NP_491750.3 GPI_EPT_3 52..319 CDD:293747 66/309 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1524
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.