DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrp4 and ABCC1

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_001031116.1 Gene:ABCC1 / 839920 AraportID:AT1G30400 Length:1622 Species:Arabidopsis thaliana


Alignment Length:1343 Identity:471/1343 - (35%)
Similarity:729/1343 - (54%) Gaps:102/1343 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DELP--EN--PRERSSPLSSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSDSLGDRLCAAWDE 67
            :|||  ||  |...::...|:.|.:..|::..|.|:.|.:||::......|:::|......:||:
plant   217 EELPGGENICPERHANLFDSIFFSWLNPLMTLGSKRPLTEKDVWHLDTWDKTETLMRSFQKSWDK 281

  Fly    68 QVAKNETPRLGRALTKVFGFHLFITGVFLLAQEFLTKVTQPICLIGVMAYFAGNDPDRSKAQLWA 132
            ::.|.: |.|.|||....|...:..|.:.:..: .::...|:.|..::.....|:| .....::|
plant   282 ELEKPK-PWLLRALNNSLGGRFWWGGFWKIGND-CSQFVGPLLLNELLKSMQLNEP-AWIGYIYA 343

  Fly   133 AGLIAGSVFSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQVVNLLSNDVG 197
            ..:..|.|..|.....|...::.:|.::|.||.:.::||:|||:.........|::.||::.|..
plant   344 ISIFVGVVLGVLCEAQYFQNVMRVGYRLRSALIAAVFRKSLRLTNEGRKKFQTGKITNLMTTDAE 408

  Fly   198 RFDLVLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLFLPFQSYLGKRTSVLRLRTALR 262
            ....:..::|.:|.||..:|....|:|.::|::|:.|...::|..|.|:.:..:|..|......|
plant   409 SLQQICQSLHTMWSAPFRIIVALVLLYQQLGVASIIGALFLVLMFPIQTVIISKTQKLTKEGLQR 473

  Fly   263 TDERVRMMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYIRGILISFAMFLSR---- 323
            ||:|:.:|||:::.:..:|.||||..|...|:..|.:|:...::..    :|.:|.||:..    
plant   474 TDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQ----LLSAFNMFILNSIPV 534

  Fly   324 IFTSSSLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSVRRLEAFMHRPE 388
            :.|..|...|.|||..|...:||...:.:::||..:.| .|..|::.....||:.|||       
plant   535 LVTVVSFGVFSLLGGDLTPARAFTSLSLFSVLRFPLFM-LPNIITQMVNANVSLNRLE------- 591

  Fly   389 TKVRDKSKVKNANQKAESPNGDSPKGNGIPENLIEFSQFQARWESHSLEPTLEDINLQLGRRKLV 453
                   :|.:..::...||  .|...|.|...|....|.  |:|.:..|||.:|||.:....||
plant   592 -------EVLSTEERVLLPN--PPIEPGQPAISIRNGYFS--WDSKADRPTLSNINLDIPLGSLV 645

  Fly   454 AVIGPVGAGKSSLIQAILGELPGES-GTLRINGSYSYAAQEPWLFTGTVRQNILFGLDWDKHRYR 517
            ||:|..|.||:|||.|:|||||..| .|:.:.||.:|..|..|:|..|||.|||||..:|:.:|.
plant   646 AVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYE 710

  Fly   518 TVVKKCALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDPLSAVDTHVG 582
            .|:...||:.|.||||.||.|.:||||.::|||||.|:|:|||||..:|:.:|||||||:|.|||
plant   711 RVIDVTALQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVCILDDPLSALDAHVG 775

  Fly   583 RHLFDQCMRGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLDFAQLLTAPN 647
            :.:|::|::..|.....:|||:||.||.|.|.|:::.:|.:...|||..:..||..|.:|:....
plant   776 QQVFEKCIKRELGQTTRVLVTNQLHFLSQVDKILLVHEGTVKEEGTYEELCHSGPLFQRLMENAG 840

  Fly   648 KDAEDLD------EIDGAGGDGLDLLNVPSLSRRG--SKNSKPSTRNNSFTSLSSMAESMAQEAS 704
            | .||..      |:|......::..|..:|.:.|  :||||   ..||.               
plant   841 K-VEDYSEENGEAEVDQTSVKPVENGNANNLQKDGIETKNSK---EGNSV--------------- 886

  Fly   705 LQMQETRVEGKIGLGLYKEYLTS-GSSWFMIFFMVFLC-LATQILCSAADYFLSYWVDKNVDGQT 767
            |..:|.|..|.:...:.:.|..: |.:|  :..|:.:| :.||:...::..:||.|.|..    |
plant   887 LVKREERETGVVSWKVLERYQNALGGAW--VVMMLVICYVLTQVFRVSSSTWLSEWTDSG----T 945

  Fly   768 DINTDPQDMYY---FAALNVAVVVFTIVRTMLFYKMAMRSSTQLHNAMYQGITRAAMYFFNTNPS 829
            .....|  ::|   :|.|:...|..|::.:......::.::.::|:||...|.||.|.||.|||.
plant   946 PKTHGP--LFYNIVYALLSFGQVSVTLINSYWLIMSSLYAAKKMHDAMLGSILRAPMVFFQTNPL 1008

  Fly   830 GRILNRFSKDLGQLDEVLPSVMLDVVQLFL----TLLGIIVVICITNPYYLILTLALAIIFYYIR 890
            |||:|||:||:|.:|..:..    .|.:|:    .||..:::|.|.:...|...:.|.::||...
plant  1009 GRIINRFAKDMGDIDRTVAV----FVNMFMGSIAQLLSTVILIGIVSTLSLWAIMPLLVVFYGAY 1069

  Fly   891 EFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFDNLQDLHSSGYYTF--L 953
            .:|..|||::||:::..|||:|:.....:.||.:|||..|. :.:||. |.:.:.::..:|.  :
plant  1070 LYYQNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAY-DRMAEI-NGRSMDNNIRFTLVNM 1132

  Fly   954 ATNRAFGYYLD------CFCTLYIVIIILNYFINPPQSPGEVGLAITQAMGMTGMVQWAMRQSAE 1012
            |.||..|..|:      .:.|..:.::......|.......:||.::.|:.:|..:...:|.::.
plant  1133 AANRWLGIRLEVLGGLMVWLTASLAVMQNGKAANQQAYASTMGLLLSYALSITSSLTAVLRLASL 1197

  Fly  1013 LENTMTAVERVVEYDEIEPEGEFDSREGKKPSPSWPEKGEIIAEDLCLRYFPDPQAKYVLKALNF 1077
            .||::.:||||..|.||..|... ..|..:|.|.||..|.|..||:.|||  .|:...||..::|
plant  1198 AENSLNSVERVGNYIEIPSEAPL-VIENNRPPPGWPSSGSIKFEDVVLRY--RPELPPVLHGVSF 1259

  Fly  1078 RIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIITIDERDTADMGLFDLRSKISIIPQEPVLF 1141
            .|.|.:|||||||||||||||:|||||: ...:|.|.|||.|....||.|||..:.||||.||||
plant  1260 LISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGIIPQAPVLF 1324

  Fly  1142 SGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKISEGGSNFSVGQRQLVCLARAIL 1206
            ||::|:|||||.|:|||.||::||...||..|...|.||.::::|.|.|||||||||:.||||:|
plant  1325 SGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGENFSVGQRQLLSLARALL 1389

  Fly  1207 RENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLNTIMDSDRVLVMDAGHLVEFGS 1271
            |.:::||:|||||.||.:||.|||.|||.:|:.||:|.||||||||:|.|:|||:|:|.:.||.|
plant  1390 RRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVLDSGKVQEFSS 1454

  Fly  1272 PYELLTSSESKIFHGMVMETGQNTFDSLLKVAEKAHLESMKPK 1314
            |..||::.||. |..||..||....:.|..:.    ||:.:.:
plant  1455 PENLLSNGESS-FSKMVQSTGTANAEYLRSIT----LENKRTR 1492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 456/1297 (35%)
ABC_membrane 93..359 CDD:294371 69/269 (26%)
ABCC_MRP_domain1 422..622 CDD:213217 97/200 (49%)
ABC_membrane 735..978 CDD:294371 73/258 (28%)
ABCC_MRP_domain2 1051..1272 CDD:213211 129/221 (58%)
ABCC1NP_001031116.1 PLN03130 1..1622 CDD:215595 471/1343 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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