DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrp4 and ABCC8

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_001326629.1 Gene:ABCC8 / 821679 AraportID:AT3G21250 Length:1470 Species:Arabidopsis thaliana


Alignment Length:1339 Identity:445/1339 - (33%)
Similarity:687/1339 - (51%) Gaps:138/1339 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPENPRERSSPL------SSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSDSLGDRLCAAWD- 66
            |.:|||:.|:.|      |.|.|.:..|:|..|.||.|..:|:...:.|.::.....:...||| 
plant   198 LTKNPRKESARLATAGFFSILSFSWMNPLLSLGFKKPLSPEDIPSVVPEDEAQLAYKKFSQAWDT 262

  Fly    67 ---EQVAKNETPRLGRALTKV-FGFHLFITGVFLLAQEFLTKVTQPICLIGVMAYFAGNDPDRSK 127
               ::.:..|...:.||:.|| |..::|| .||...:.|.. |:.|:.|...:.|...:..|...
plant   263 LLGDESSTKERNLVFRAVVKVYFKENIFI-AVFAFLRTFAV-VSLPLMLYVFVDYANSDHRDLRN 325

  Fly   128 AQLWAAGLI-AGSVFSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQVVNL 191
            .....|.|: ...|.|:.:.|.|... ...||::|.||....|:|.|:||.......:.|::||.
plant   326 GFFNLACLVMLKLVESLTMRHWYFAS-RRSGMRIRSALMVAAYKKQLKLSSLGRKRHSSGEIVNY 389

  Fly   192 LSNDVGRFDLVLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLF----LPFQSYLGKRT 252
            ::.|..|....|...|..|...|:|:..|.:::..:|..:..|:.::||.    |||    .|..
plant   390 IAVDAYRMGEFLWWFHSGWSLSLQLLLSTAVLFGVVGAGAFPGLILLLLCGLLNLPF----AKML 450

  Fly   253 SVLRLRTALRTDERVRMMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYIRGILISF 317
            ...:.:..:..|:|:|..:||::.::|||:.:||..|.|.:|..|.:|...:.:....:. ..||
plant   451 QNCQTQFMIAQDKRLRSTSEILNSMKVIKLQSWEDEFKKKIESCRDDEFTWLAKAQLTKA-FGSF 514

  Fly   318 AMFLSRIFTSSSLIAF----VLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSVR 378
            ..::|....||  :.|    :|....|||...|.|.|...::...|.: .|..||...:..||.:
plant   515 LYWMSPTIVSS--VVFLGCALLKSAPLNASTIFTVLATLRVMSEPVKI-IPDAISAIIQGNVSFQ 576

  Fly   379 RLEAFMHRPETKVRDKSKVKNANQKAESPNGDSPKGNGIPENLIEFSQFQARWESHSLEPTLEDI 443
            ||..|:...|.|:   .:::.:...|.....|...||        |.     ||..:..|||.:|
plant   577 RLNNFLLDDELKM---DEIERSGLDASGTAVDIQVGN--------FG-----WEPETKIPTLRNI 625

  Fly   444 NLQLGRRKLVAVIGPVGAGKSSLIQAILGELPGESGTLRINGSYSYAAQEPWLFTGTVRQNILFG 508
            :|::...:.|||.||||||||||:.|:|||:|..|||:::.||.:|.:|..|:.:||:|.|||:|
plant   626 HLEIKHGQKVAVCGPVGAGKSSLLHAVLGEIPKVSGTVKVFGSIAYVSQTSWIQSGTIRDNILYG 690

  Fly   509 LDWDKHRYRTVVKKCALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDP 573
            ...:..||...:|.|||::|......||.|.:|:||.:||||||.||.||||||..||:||||||
plant   691 KPMESRRYNAAIKACALDKDMNGFGHGDLTEIGQRGINLSGGQKQRIQLARAVYADADVYLLDDP 755

  Fly   574 LSAVDTHVGRHLFDQCMRGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLD 638
            .||||.|....||.:|:...|:.:.|||||||::||.:.|.|::|::|.|:..|.|..:...|..
plant   756 FSAVDAHTAGVLFHKCVEDSLKEKTVILVTHQVEFLSEVDQILVMEEGTITQSGKYEELLMMGTA 820

  Fly   639 FAQLLTAPNKDAEDLDEIDGAGGDGLDLLNVPSLSRRGSKNSKPSTRN-NSFTSLSSMAESMAQE 702
            |.||:.|.|              |.:.:|.:.|....|....:...|. .:.|.:..:.|.:.:.
plant   821 FQQLVNAHN--------------DAVTVLPLASNESLGDLRKEGKDREIRNMTVVEKIEEEIEKT 871

  Fly   703 ----ASLQMQETRVEGKIGLGLYKEYLTSGSSWFMIF--------FMVFLCLATQILCSAADYFL 755
                ..|..:|.:..|.:|:..:.:|:.....|.:::        |:||...:|           
plant   872 DIPGVQLTQEEEKESGYVGMKPFLDYIGVSRGWCLLWSSVLGQVGFVVFQAAST----------- 925

  Fly   756 SYWVDKNVDGQTDINTDPQDMYYFAALNVAVVVFTIVRTMLFYKMAMRSSTQLH------NAMYQ 814
             ||:...:......||            :.:.|::|:.|:....:..|:.|..|      .|.:.
plant   926 -YWLAFAIGIPKITNT------------MLIGVYSIISTLSAGFVYARAITTAHLGLKASKAFFS 977

  Fly   815 GIT----RAAMYFFNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTL-LGIIVVICITNPY 874
            |.|    :|.|.||::.|.||||.|.|.||..||..:|...:.||...:.| ..::::..:|...
plant   978 GFTNAVFKAPMLFFDSTPVGRILTRASSDLNVLDYDVPFAFIFVVAPAVELTAALLIMTYVTWQV 1042

  Fly   875 YLILTLALAIIFYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFD 939
            .:|..||||.. ..::::||.::|::.|:....::|:.::.:.|..|:.||||.|..:.....:.
plant  1043 IIIALLALAAT-KVVQDYYLASARELIRINGTTKAPVMNYAAETSLGVVTIRAFGTAERFFKNYL 1106

  Fly   940 NLQDLHSSGYYTFLATNRAFGYYL---------DCF-CTLYIVIIILNYFINPPQSPGEVGLAIT 994
            ||.|..:   ..|..:|.|..:.:         ..| |.|.:::|...|.     :||.|||:::
plant  1107 NLVDADA---VLFFLSNAAMEWVILRIETLQNVTLFTCALLLILIPKGYI-----APGLVGLSLS 1163

  Fly   995 QAMGMTGMVQWAMRQSAELENTMTAVERVVEYDEI--EPEGEFDSREGKKPSPSWPEKGEIIAED 1057
            .|:.:|....:..|....|.|::.:|||:.:|..|  ||....|.   |:|..|||..|.|..::
plant  1164 YALTLTQTQVFLTRWYCTLSNSIISVERIKQYMNIPEEPPAIIDD---KRPPSSWPSNGTIHLQE 1225

  Fly  1058 LCLRYFPDPQAKYVLKALNFRIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIITIDERDTAD 1121
            |.:||  .|.|..|||.::...|...:||:|||||:|||:||:||||| ....|.|.||..|.:.
plant  1226 LKIRY--RPNAPLVLKGISCTFREGTRVGVVGRTGSGKSTLISALFRLVEPASGCILIDGIDISK 1288

  Fly  1122 MGLFDLRSKISIIPQEPVLFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKISE 1186
            :||.|||.|:|||||||.||.|.:|.||||...|:|.::|.|||:.:||..||.|||.|.|.:|:
plant  1289 IGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSVSD 1353

  Fly  1187 GGSNFSVGQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLNT 1251
            .|.|:|||||||.||.|.:|:.|::||:|||||::|..|||:||..||.:|.||||:|:|||:.|
plant  1354 EGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPT 1418

  Fly  1252 IMDSDRVLVMDAGHLVEFGSPYELLTSSESKIFHGMVME 1290
            ::|||.|:|:..|.|||:..|.:|:.:  ...|..:|.|
plant  1419 VIDSDMVMVLSFGDLVEYNEPSKLMET--DSYFSKLVAE 1455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 441/1321 (33%)
ABC_membrane 93..359 CDD:294371 71/274 (26%)
ABCC_MRP_domain1 422..622 CDD:213217 97/199 (49%)
ABC_membrane 735..978 CDD:294371 64/271 (24%)
ABCC_MRP_domain2 1051..1272 CDD:213211 118/221 (53%)
ABCC8NP_001326629.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2369
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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