DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrp4 and abcb11a

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:XP_009303249.2 Gene:abcb11a / 797269 ZFINID:ZDB-GENE-050517-13 Length:1320 Species:Danio rerio


Alignment Length:1356 Identity:305/1356 - (22%)
Similarity:558/1356 - (41%) Gaps:261/1356 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VFGFHLFITGVFLLAQEFLTKVTQP--ICLIGVMAYFAGN---DPDRSKAQLWA---AGLIAGSV 140
            |:|   .:|..|:..:..:.::|.|  .|:...:::..|:   .||.:......   |.:...::
Zfish    75 VYG---MMTNTFVEYEVEILELTDPNKTCINNTISWMNGSAVQRPDNTTIYCGVDIEAEMTNFAL 136

  Fly   141 FSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGD-----------TTVGQVVNLLSN 194
            :.:.||    :|:|.|.........|...|:..|:.:|....           .:||::...:|:
Zfish   137 YYIGIG----VGVLILSFFQITFWVSAAARQIQRIRKTYFRKIMCMEIGWFDCNSVGELNTRMSD 197

  Fly   195 DVGRFDLVLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLFLPFQSYLGKRTSVLRLRT 259
            |:.:.:..:.:...::|..:.    |::....:|.  :.|..:.|:.:.....||....::.:..
Zfish   198 DINKINNAIADQVSIFIERIS----TFIFGFMVGF--IGGWKLTLVVIAVSPLLGLAAGLMAMAV 256

  Fly   260 ALRTDERVR-------MMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYI-RGILIS 316
            |..|...::       :.:|::|.|:.:..:.     |:..|..|::..|...|...| :|::|.
Zfish   257 ARLTGRELKAYAKAGAVADEVLSSIRTVAAFG-----GEHKEAERYDRNLVQAQEWGIKKGMIIG 316

  Fly   317 -FAMFLSRIFTSSSLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISE-FAELLVSVRR 379
             |..:|..|.    .:.:.|         ||:..:...|..:.:|   |.|:.: |..:|:....
Zfish   317 VFQGYLWCII----FLCYAL---------AFWFGSKLVIETQELT---PGGLVQVFFGVLIGAMN 365

  Fly   380 -------LEAFMHRPETKVRDKSKVKNANQKAE----SPNG---DSPKGNGIPENLIEFSQFQAR 430
                   ||||   ...:...||.....:::.|    |..|   |..||:      |||......
Zfish   366 LGQASPCLEAF---ASGRAAAKSIFDTIDREPEIDCFSDEGHTLDKVKGD------IEFHSVNFN 421

  Fly   431 WESHSLEPTLEDINLQLGRRKLVAVIGPVGAGKSSLIQAILGELPGESGTLRINGS--------- 486
            :.|......|:|:|:.:...:..|.:||.|:||::.||.|........|.:.::|.         
Zfish   422 YPSRPEVKILDDLNIVVKAGETTAFVGPSGSGKTTTIQLIQRFYDPSEGMVSLDGHDIRSLNIQW 486

  Fly   487 ----YSYAAQEPWLFTGTVRQNILFGLDWDKHRYRTVVKKCALERDFEL-LPFGDKTIVGERGAS 546
                .....|||.||..|:.:||.:|......:......|.|...:|.: ||....|:|||.|..
Zfish   487 LRSLIGVVEQEPVLFATTIAENIRYGRAGVTMQEIIEAAKQANAYNFIMSLPQTFDTLVGEGGGQ 551

  Fly   547 LSGGQKARISLARAVYRRADIYLLDDPLSAVDTH---VGRHLFDQCMRGYLRSELVILVTHQLQF 608
            :|||||.||::|||:.|...|.|||...||:|..   |.:...|:..:|    ...|.:.|:|..
Zfish   552 MSGGQKQRIAIARALVRNPRILLLDMATSALDNESEAVVQEALDKARQG----RTTISIAHRLST 612

  Fly   609 LEQADLIVIMDKGRISAMGTYSS-MKRSGLDFAQLLTAPNKDAE-DLDEIDGAGGDGL-DLLNVP 670
            :..||:||..:.||....||:|. :.:.|:.|. |:|..|:..: |.|:.:......: :...:.
Zfish   613 IRNADVIVGFEHGRAVERGTHSQLLDKKGVYFT-LVTLQNQGKDTDTDKPENTAESRVTEEAELE 676

  Fly   671 SLSRRGSKNSKPSTRNNSFTSLSSMAESMAQEAS-----LQMQETRVEGKIGLGLYKE------- 723
            .|.|..|.:.:...|..|.:.||:....::.:..     .:|:|:. ..|...|..||       
Zfish   677 ELRRFSSGSYESVLRRRSLSQLSNSLSVISGKFDFNSDLFEMEESD-NNKKSKGKAKEDIKPAPV 740

  Fly   724 ------------YLTSGSSWFMI---FFMVFLCLATQILCSAADYFLSYWVDKNVDGQTDINTDP 773
                        |:..||....|   ...::..|.:|||                 |...| .||
Zfish   741 ARILKYNRPEWPYMLLGSIGAAINGSLNPMYALLFSQIL-----------------GTFSI-PDP 787

  Fly   774 QDMYYFAALNVAVVVFTIVRTMLFYKMAMRS----------STQLHNAMYQGITRAAMYFFN--T 826
            .|..  ..:|...::|.::..:.|:...::.          :.:|....:|.:.:..:.:|:  .
Zfish   788 DDQR--RQINGICILFVVIGVVSFFSQFLQGYSFAKSGELLTRRLRKFGFQAMLKQEIGWFDDPM 850

  Fly   827 NPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIVVICITNPYY------LILTLALAII 885
            |..|.:..|.:.:...:.....| .:.::...||.:|...:|.    ||      |::|..|.:|
Zfish   851 NSPGALTTRLATNASMVQGATGS-QIGMIVNSLTNIGASFIIA----YYFSWKLSLVVTCFLPLI 910

  Fly   886 ----FYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFD-NLQDLH 945
                .:..:......:.|...|||..:..     |..::.:.||..|..:|..:|:|: .||..:
Zfish   911 GLSGVFQSKMLTGLANEDKTALEAAGQVS-----SEAMSNIRTIAGLAKEKHFVAQFEKQLQAPY 970

  Fly   946 SSGYYTFLATNRAFGYYLDCFCTLYIVIIIL--------NYFINPPQSPGEVGL----------- 991
            .:      |..:|:.|.: ||.....||.:.        .|.::      ..||           
Zfish   971 KA------AKKKAYVYGI-CFAFARCVIFMAYAASFRYGGYLVS------HEGLQYMMVFRVISA 1022

  Fly   992 ------AITQAMGMTGMVQWAMRQSAELENTMTAVERVVEYDEIEPEGEFDSREGKKPSPSWPE- 1049
                  |:.:|...|.....|...:|:|   ...::||.:.:..:.||:           ||.: 
Zfish  1023 LVTSATALGRASSFTPDYAKAKISAAQL---FQLLDRVPKINVSKTEGQ-----------SWNDF 1073

  Fly  1050 KGEIIAEDLCLRYFPDPQAKYVLKALNFRIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIIT 1113
            ||::..:. |...:|......||:.|...:.|.:.:..||.:|.|||:.:..|.|. ..:||.:.
Zfish  1074 KGKVEFKG-CRFTYPSRPDVQVLRGLVVSVHPGQTLAFVGSSGCGKSTSVQLLERFYDPDEGQVL 1137

  Fly  1114 IDERDTADMGLFDLRSKISIIPQEPVLFSGSMRYNLDPFEEYND-------AKLWDALEEVKLKP 1171
            ||.|.:..:.:..|||:|.|:.||||||..|:..|:    :|.|       .::.||.::..|..
Zfish  1138 IDGRPSDSISVPFLRSQIGIVSQEPVLFDCSIAENI----QYGDNSRTVSMEEIIDAAKKAYLHD 1198

  Fly  1172 LISELPNGLQSKISEGGSNFSVGQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSK 1236
            .:..||:..::::...||..|.||:|.:.:||||:|..::|::||||:.:|.:::..:||.:...
Zfish  1199 FVMTLPDKYETQVGAQGSQLSRGQKQRIAIARAIVRNPKILLLDEATSALDTESEKTVQAALDEA 1263

  Fly  1237 FRDCTVLTIAHRLNTIMDSDRVLVMDAGHLVEFGSPYELLTSSESKIFHGMVMETG 1292
            .:..|.:.|||||:||..:|.:.||..|.::|.|:..||:.   .|..:..::.||
Zfish  1264 RQGRTCIVIAHRLSTIQSADIIAVMSQGEVIEKGTHDELMA---KKAAYYKLVTTG 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 302/1339 (23%)
ABC_membrane 93..359 CDD:294371 48/293 (16%)
ABCC_MRP_domain1 422..622 CDD:213217 65/216 (30%)
ABC_membrane 735..978 CDD:294371 49/273 (18%)
ABCC_MRP_domain2 1051..1272 CDD:213211 73/228 (32%)
abcb11aXP_009303249.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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