DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrp4 and pgp-14

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_510128.1 Gene:pgp-14 / 181416 WormBaseID:WBGene00004008 Length:1327 Species:Caenorhabditis elegans


Alignment Length:1448 Identity:331/1448 - (22%)
Similarity:580/1448 - (40%) Gaps:325/1448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PEN--------PRERSSPLSSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSD-SLGDRLCAAW 65
            |:|        |.:||:.|       |:|.|               |:.:.||| .:...|.|.:
 Worm     7 PDNRGFDDQRRPSQRSTVL-------AIPAL---------------AVNDPKSDPKIASDLPANY 49

  Fly    66 ---DEQVAKNETPRLGRALTKVFGFHL---------------FITGVFLLAQEF----------- 101
               |:...|..||.|   |.|:..:.|               .|.|:|...::|           
 Worm    50 VDDDDDAPKMYTPSL---LEKILNYALCRGDIANQQLEAQPVSIPGLFRYGKKFDYLLLFIGTIC 111

  Fly   102 --LTKVTQPICLIGVMAYFAGNDPDRSKAQLWAAGLIAGSVFSVCIGHP--------------YM 150
              ::.|:|||                       ..|::|.|.:..:.:|              | 
 Worm   112 AIISGVSQPI-----------------------LALVSGRVTNALLVYPPTSKQFRNKANENVY- 152

  Fly   151 LGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQ-----VVNLLSNDVGRFDL--------- 201
               :.||:.:.|::::.|.....:...|.:    :.|     |.::|..:.|.||.         
 Worm   153 ---IFLGIGIFISITNFIQYMCFQHCCTRV----MAQMRHRFVYSVLRQNAGWFDKNHSGTITTK 210

  Fly   202 -----------------VLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVA----IMLLFLPFQ 245
                             ||:....:.||   .|.|.|:....:. |.|.|||    |.:..|..|
 Worm   211 LNDSMERIREGIGDKLGVLLRGFAMLIA---AIVVAYIYEWRLA-SMMLGVAPTCCICMSLLARQ 271

  Fly   246 SY---------LGK-----RTSVLRLRTALRTDERVRMMNEIISGIQVIKMYA-----WEKPFGK 291
            ..         :||     ..|::.:||....:.:..|:....:.::..:.:|     |...||.
 Worm   272 MTSTTIKELIGVGKAGSIAEESLMGVRTVQAFNGQEEMVGRYEAELEKGRKFAVWKGFWSGFFGG 336

  Fly   292 VVEMTRFNEMLCIKQVNYIRGILISFAMFLSRIFTSSSLIAFVLLGNILNAEKAFFVTAYYNILR 356
            :.....|:.:.|        |:|....:....|.|:...:..|::..:|.|              
 Worm   337 LFFFWLFSFLGC--------GMLYGAYLLKVGIITTPGDVFIVVMSMLLGA-------------- 379

  Fly   357 RSVTMFFPQGISEFAELLVSVRRLEAFMHRPETKVRDKSKVKNANQKAESPNGDSPKGNGIPENL 421
                 :|...||....:|::.|...|.:::...:|........|.::.::..|           .
 Worm   380 -----YFLGLISPHMMVLLNARVSAASIYQTIDRVPKIDPYSKAGKRLQNVVG-----------R 428

  Fly   422 IEFSQFQARWESHSLEPTLEDINLQLGRRKLVAVIGPVGAGKSSLIQAILGELPGESGTLRING- 485
            ::|.....|:.|......|..:||.:.....||::|..|.|||:.:..:......|:|.:.|:| 
 Worm   429 VKFENVHFRYPSRKDAKILNGLNLVVEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAGNVTIDGT 493

  Fly   486 ------------SYSYAAQEPWLFTGTVRQNILFGLDWDKHRYRTVVKKCALERDF-ELLPFGDK 537
                        :.....|||.||..|:..|:|.|...........|.|.|...|| |.:|.|..
 Worm   494 DVRELNIEWLRNTVGIVQQEPILFNDTIHNNLLIGNPGSTRETMIEVCKMANAHDFIEKMPKGYD 558

  Fly   538 TIVGERGASLSGGQKARISLARAVYRRADIYLLDDPLSAVDTHVGRHLFDQCMRGYLRSELVILV 602
            |::|:.|..||||||.|:::||.:.|...:.|||:..||:|.. ...:....:....:....|::
 Worm   559 TLIGDGGVQLSGGQKQRVAIARTLIRDPKVLLLDEATSALDAQ-SESIVQSALNNASKGRTTIMI 622

  Fly   603 THQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLDFAQLLTAP--NKDAEDLDEIDGAGGDGLD 665
            .|:|..:.:||.||..:||.|...|.:..:.|.|..:..|:.|.  ..|.|..:|.:   .:.:|
 Worm   623 AHRLSTIREADKIVFFEKGVIVEAGNHEELVRLGGRYFDLVKAQQFKADPEATEEFE---EEEID 684

  Fly   666 LLNVPSLSRRGSKNS---------KPSTRNNSFTSLSSMAESMAQEASLQMQETRV---EGKIGL 718
            |.:....|||.|..|         :.::.|:||:.....|::.|:.::....|..:   :|:|..
 Worm   685 LDDTSRSSRRSSMTSARSGSEAFRRGNSLNDSFSGSKRSAQADAENSAFAANEAAIMAEDGQITA 749

  Fly   719 G---LYKEYLTSGSSWFMIFFMVFLCLATQILCSAADYFLSYWVDKNVDGQTDINTDPQDMY--- 777
            |   ::|.  ..|:..:|....||..:....|.:.|..|  .||   .:|.|.:....:.|:   
 Worm   750 GYLDIFKN--AKGNYLYMFLGTVFALIRGLELPALALIF--GWV---FEGFTFVPYGGRMMHRMA 807

  Fly   778 ----YFAALNVAV--------VVFTIVRTMLFYKMAMRSSTQLHNAMYQGITRAAMYFFN-TNPS 829
                .||::.|.|        |:|.:|...|..:..::|   ..|.:||.    |.||.| .:..
 Worm   808 MAVIAFASVGVGVWFSQLASSVLFAVVSENLSMRFRVQS---FRNLLYQD----ASYFDNPAHAP 865

  Fly   830 GRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIVVICITNPY-----YLILTLALAIIFYYI 889
            |:::.|.:.|...:..|:.:.||.|:   ..|..||..|.|...|     .|..:|.|.:.|..|
 Worm   866 GKLITRLASDAPNIKAVVDARMLQVI---YALAAIIANIAIAFIYCWQIGILGTSLILLLAFVMI 927

  Fly   890 REFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFDNLQD----------- 943
            ...|..:..:|::::......|...:   |..:.||:.| .:.||.  ||:.|.           
 Worm   928 GLAYKISLMNVEQIQNDDAGRIAIEI---IENVKTIQLL-TRCELF--FDHYQTSSKQQKRSELK 986

  Fly   944 ---LHSSGYYTFLATNRAFGYYLDCFCTLYIVIIILNYFINPPQSPGEVGLAITQAMGMTGMVQW 1005
               :.:..|    :..::|.|::.||  .|.|.|.:.|..:........|: |...:|...::..
 Worm   987 KGMIEAINY----SLTQSFMYFMMCF--TYAVGIRIIYQGDKSSDDTFKGI-IAMMLGAVAVMNS 1044

  Fly  1006 AMRQSAELENTMTAVERVVEYDEIEPEGEFDSREGKKPSPSWPEKGEIIAEDLCLRYFPDPQAKY 1070
            | :...|.....||...:......:|. ..|..||.:|.    .:|.|:.|::...| |....:.
 Worm  1045 A-QYFPEFVKAKTAAGMLFNIIYRKPR-TGDLMEGDRPE----IRGNILFENVKFSY-PQRPLQP 1102

  Fly  1071 VLKALNFRIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIITIDERDTADMGLFDLRSKISII 1134
            ::|.|.:.....:.|.:||.:|:|||:.|..|.|. ....|.:.||.:|...:.||.||::::::
 Worm  1103 IMKGLQWTALRGQTVALVGPSGSGKSTNIGMLERFYDVTGGALRIDGQDIRKLSLFHLRTQMALV 1167

  Fly  1135 PQEPVLFSGSMRYNL------DPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKISEGGSNFSV 1193
            .|||.||:|::|.|:      .|.|:.|     .|||.......::.||.|:.:.:.|.|...|.
 Worm  1168 GQEPRLFAGTIRENVCLGLKDVPLEKIN-----QALELANANRFLANLPAGIDTDVGEKGGQLSG 1227

  Fly  1194 GQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLNTIMDSDRV 1258
            ||:|.:.:|||::|:.::|::||||:.:|.:::..:|..:.......|.:||||||::|.:||.:
 Worm  1228 GQKQRIAIARALVRDPKILLLDEATSALDSESERAVQEALDRAREGRTCITIAHRLSSIQNSDLI 1292

  Fly  1259 LVMDAGHLVEFGSPYELL 1276
            :.:|.|.:.|.|:..:|:
 Worm  1293 VYIDKGKVQEAGNHTQLM 1310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 330/1446 (23%)
ABC_membrane 93..359 CDD:294371 57/346 (16%)
ABCC_MRP_domain1 422..622 CDD:213217 61/213 (29%)
ABC_membrane 735..978 CDD:294371 64/277 (23%)
ABCC_MRP_domain2 1051..1272 CDD:213211 73/227 (32%)
pgp-14NP_510128.1 PTZ00265 104..1321 CDD:240339 304/1326 (23%)
ABC_membrane 109..377 CDD:279056 52/310 (17%)
ABC_MTABC3_MDL1_MDL2 429..666 CDD:213216 67/237 (28%)
ABC_membrane 769..1039 CDD:294371 68/297 (23%)
ABC_MTABC3_MDL1_MDL2 1086..1323 CDD:213216 73/231 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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