DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrp4 and mrp-4

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:NP_509658.1 Gene:mrp-4 / 181202 WormBaseID:WBGene00003410 Length:1573 Species:Caenorhabditis elegans


Alignment Length:1416 Identity:484/1416 - (34%)
Similarity:750/1416 - (52%) Gaps:173/1416 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ADELPE-----------NPRERSSPLSSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSDSLGD 59
            ||..||           :|...||.|:.:...:...:...|.||.||..|||...:...|:.|..
 Worm   200 ADASPEGYKYLSAARNPSPETTSSFLNRITMWWFNSLCSLGVKKPLEVSDLYSLNEADTSNLLVP 264

  Fly    60 RLCAAWDEQVAKNE-------------------------TPRLGRALTKVFG------------- 86
            :....||:|..|.|                         ||.|....|..:|             
 Worm   265 KWYNLWDKQSKKFEETAARRRIGSNASRTNRRRTSSNDTTPLLNDQSTDDYGSVPAGQSTQKMPS 329

  Fly    87 -----FHLF----ITGVFLLAQEFLTKVTQPICLIGVMAYFAGNDPDRSKAQLWAAGLIAGSVF- 141
                 |.:|    ||.:|:.....:.....|:.|..::.:     .:..:..:|...::|.::| 
 Worm   330 IIWTLFLMFKWDVITAMFVKLLSDVLLFCNPLLLKSLIRF-----TEELERPMWQGVVLAFTMFF 389

  Fly   142 -----SVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQVVNLLSNDVGRFDL 201
                 |:.:.|.:.| :..:|.:::..|::.:|||.||||..|..:.|||::|||::.||.||..
 Worm   390 SAELSSILLSHYFYL-MYRVGTRVQTCLTAAVYRKTLRLSNAARREKTVGEIVNLMAIDVDRFQQ 453

  Fly   202 VLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLFLPFQSYLGKRTSVLR---LRTALRT 263
            :.......|..|.::....:|::.::|:|...|||:|:|..|....:   |.::|   :......
 Worm   454 ITPQTMQYWSNPFQIGLALFLLFQQLGVSVFSGVAVMVLLFPINFVI---TMIIRKWQIAQMYYK 515

  Fly   264 DERVRMMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYIR---GILISFAMFLSRIF 325
            |||.:|:||:::||:|||:||||.|..:|:|..|..|:..||:..::|   .:|.:.:.||..:.
 Worm   516 DERTKMVNEVLNGIKVIKLYAWEPPMEQVIEDLREQELGLIKKAAFLRTFSDMLNTASPFLVALS 580

  Fly   326 TSSSLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSVRRLEAFMHRPETK 390
            |.::.| ::...|:|..|.||.....:|.||..::. ..:.|::..:::||.|||:.|:      
 Worm   581 TFATFI-YIDPKNVLTPEIAFVSLTLFNQLRSPMSQ-VAELITQTVQVVVSNRRLKEFL------ 637

  Fly   391 VRDKSKVKNANQKAESPNGDSPKGNGIPENLIEFSQFQARWES--HSLEPTLEDINLQLGRRKLV 453
            |.::..|:..:.:|...|           ::|...:....|||  |...|||.:|:..:.|.:||
 Worm   638 VSEELNVEAIDHRARDNN-----------DVICLKEACLSWESAEHQPVPTLTNISFSVNRGQLV 691

  Fly   454 AVIGPVGAGKSSLIQAILGELPGESGTLRINGSYSYAAQEPWLFTGTVRQNILFGLDWDKHRYRT 518
            .::|.|||||||::||::||:...||::.::|...|..|:||:...|:||||.||..:|::.|..
 Worm   692 TIVGRVGAGKSSMLQALMGEMEKLSGSISMHGRLCYVPQQPWMQNNTLRQNITFGKQFDEYFYSR 756

  Fly   519 VVKKCALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDPLSAVDTHVGR 583
            |:..|||.||.::||.||.|.:||:|.:||||||||||||||||:..||||||||:||||.|||.
 Worm   757 VLDACALYRDLQILPLGDNTEIGEKGINLSGGQKARISLARAVYQNHDIYLLDDPMSAVDAHVGS 821

  Fly   584 HLFDQCM--RGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLDFAQLLTAP 646
            .||...:  .|.||::..||||::|.|||::|||::|::|:|...|.|..:.:.|. |.|||...
 Worm   822 QLFGSVIGPEGMLRNKTRILVTNELSFLEKSDLIIVMNEGKIEYSGKYDDLMQQGA-FEQLLIEC 885

  Fly   647 NKDAEDLDEIDGA---------------GGDG-----LDLLNVPSLS-----------------R 674
            .|:..:..|.:.:               |||.     .|::..|.:.                 |
 Worm   886 EKEERERREAEASADEDDENSEPGGIMIGGDSDFEYDDDVMASPIIDHVLGTSHMSTVSGIINRR 950

  Fly   675 RGSKNSKPSTRNNSFTSLSSMAESMAQEASLQMQET-RVE-GKIGLGLYKEYLTSGSSWFMIFFM 737
            |.|.::....|..|.|...:.:.:.|...:.|:..| ||| |::.:..|.:|..:......:.|:
 Worm   951 RISTSTHKQRRRLSTTKSHTHSITSASTQTRQLTGTERVETGRVKMDTYYKYFGAMGMSIAVLFV 1015

  Fly   738 VFLCLATQILCSAADYFLSYWVDKNVDGQTDINTDPQD----MYYFAALNVAVVVFTIVRTMLFY 798
            :.:..:| |.....:.:|:.|.:.|. .::..||..|.    :..:|.|..:.::...:..:...
 Worm  1016 LGMTTST-IFSMGRNLWLTDWSNDNA-ARSGSNTTGQPIAIRLGVYAGLGFSEIILLFIGMLSLL 1078

  Fly   799 KMAMRSSTQLHNAMYQGITRAAMYFFNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLG 863
            ...:.:|..||..:.:.:.|..|.|::|.|.||||||..||:..:|.:||..:....|..|.::.
 Worm  1079 YGGVSASRNLHAPLMRNLFRVPMAFYDTTPFGRILNRIGKDIETVDVLLPFNVQFFAQCLLQVVS 1143

  Fly   864 IIVVICITNPYYLILTLALAIIFYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRAL 928
            .:::|.|:.|.:.|:.:.|::::..:..:|:.|||.:||||::.|||||||||.:|.|..||||.
 Worm  1144 TLIIIMISTPVFGIVIIPLSVMYLMVMRYYIATSRQLKRLESITRSPIYSHLSESIQGSATIRAY 1208

  Fly   929 GAQKELIAEFDNLQ----DLHSSGYYTFLATNRAFGYYLD----C---FCTLYIVIIILNYFINP 982
                .|:..|..|.    |.|....|.....||.....|:    |   |..|:..:      ...
 Worm  1209 ----HLVDRFCKLSETKVDSHVQCRYLNYVANRWLSVRLEFIGNCIVLFSALFAAL------TRT 1263

  Fly   983 PQSPGEVGLAITQAMGMTGMVQWAMRQSAELENTMTAVERVVEYDEIEPEGEFDSREGKKPSPSW 1047
            ..:.|.:||:::.|:.:|.::.:|:||..:||..:.:||||.||.|.|.|.|:.|..||:|..:|
 Worm  1264 TTTSGVIGLSVSYALNITTVLNFAVRQITKLETNIVSVERVKEYAETETEAEWKSEPGKEPPQNW 1328

  Fly  1048 PEKGEIIAEDLCLRYFPDPQAKYVLKALNFRIRPCEKVGIVGRTGAGKSSLINALFR-LSYNEGI 1111
            |.:|.|:..:...||  .|....|:|.||..|:|.|||||||||||||||:..:||| :...||.
 Worm  1329 PSEGRIVMNNYSARY--RPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRIIEAAEGQ 1391

  Fly  1112 ITIDERDTADMGLFDLRSKISIIPQEPVLFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISEL 1176
            |.:|..:.|::||.||||.::||||:||||||::|:|||||..|:|..:|..||...||...:..
 Worm  1392 IVVDGINLAEIGLHDLRSNLTIIPQDPVLFSGTLRFNLDPFNHYSDGDIWKTLEMANLKEFATAH 1456

  Fly  1177 PNGLQSKISEGGSNFSVGQRQLVCLARAILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCT 1241
            ...|...|:|||.|.|||||||||||||:||:.|||::|||||.||..||||||.|||.:|.:.|
 Worm  1457 NEQLNYIITEGGDNISVGQRQLVCLARALLRKTRVLILDEATAAVDVSTDALIQKTIREEFANAT 1521

  Fly  1242 VLTIAHRLNTIMDSDRVLVMDAGHLVEFGSPYELLTSSESKIFHGMVMETG 1292
            |||||||||||||.||::|::.|.:.||.||..||::..|: |:.|....|
 Worm  1522 VLTIAHRLNTIMDYDRIIVLNDGKVGEFDSPANLLSNRNSE-FYSMAKRAG 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 475/1382 (34%)
ABC_membrane 93..359 CDD:294371 78/277 (28%)
ABCC_MRP_domain1 422..622 CDD:213217 102/203 (50%)
ABC_membrane 735..978 CDD:294371 72/257 (28%)
ABCC_MRP_domain2 1051..1272 CDD:213211 124/221 (56%)
mrp-4NP_509658.1 MRP_assoc_pro 17..1572 CDD:188098 484/1416 (34%)
ABC_membrane 346..613 CDD:294371 78/276 (28%)
ABCC_MRP_domain1 658..862 CDD:213217 102/203 (50%)
ABC_membrane 1012..1259 CDD:294371 72/252 (29%)
ABCC_MRP_domain2 1332..1552 CDD:213211 124/221 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.730

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