DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrp4 and abcc4

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:XP_002939329.2 Gene:abcc4 / 100491006 XenbaseID:XB-GENE-957302 Length:1324 Species:Xenopus tropicalis


Alignment Length:1339 Identity:589/1339 - (43%)
Similarity:850/1339 - (63%) Gaps:87/1339 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPRERSSPLSSLMFCFALPVLFKGRKKTLEQKDLYRALKEHKSDSLGDRLCAAWDE--QVAKNE- 73
            ||.:.::..|.:.|.:..|:...|.|:.||:.|:|..|.|..|..||:.|...|::  |.|:|| 
 Frog    11 NPSQHANFCSKIFFWWLNPLFILGHKRKLEEDDMYEVLPEDASRKLGEELQWYWEKELQKAQNEG 75

  Fly    74 -TPRLGRALTKVFGFHLFITGVFLLAQEFLTKVTQPICLIGVMAYFAGNDPDRS----KAQLWAA 133
             .|||.:|:.:.......:.|:|...:|.: :|.|||.|..|::||...|.:.|    .|.:.||
 Frog    76 RKPRLTKAIIRCHWKTFSVLGLFTFFEESI-RVVQPIFLGNVISYFERYDANDSAVLANAYINAA 139

  Fly   134 GLIAGSVFSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTVGQVVNLLSNDVGR 198
            .|.|.::....:.|.|...||..|||:|:|:..:|||||||||.||:|.||.||:||||||||.:
 Frog   140 ALSACTLILAVVHHIYFYHLLRAGMKLRVAMCHMIYRKALRLSNTAMGKTTTGQIVNLLSNDVNK 204

  Fly   199 FDLVLINVHYLWIAPLELIAVTYLMYLEIGISSMFGVAIMLLFLPFQSYLGKRTSVLRLRTALRT 263
            ||.|.|.:|:||..||:.||||.|:::|||.|.:.|:|::::.:|.|..|||..:.||.:||..|
 Frog   205 FDQVTIFLHFLWAGPLQAIAVTVLLWMEIGPSCLAGMAVLIILMPLQLCLGKFFTSLRGKTAAFT 269

  Fly   264 DERVRMMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYIRGILISFAMFLSRIFTSS 328
            |.|:|.|||:|||:::|||||||:.|.::|...|..|:..:.:.:|:|.:.::.....|:|....
 Frog   270 DTRIRTMNEVISGMRIIKMYAWEQSFTELVNNIRKKEINKVLRSSYLRALNLASFFVASKIILFV 334

  Fly   329 SLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSVRRLEAFMHRPETKVRD 393
            :...:|||||:::|.:.|...:.|:.:|.:||:|||..:...:|..||:||::.|:...|     
 Frog   335 TFTTYVLLGNVISASRVFVAVSLYSAVRLTVTLFFPSAVERASEAKVSIRRIKNFLLLDE----- 394

  Fly   394 KSKVKNANQKAESPNGDSPKGNGIPEN-LIEFSQFQARWESHSLEPTLEDINLQLGRRKLVAVIG 457
                      ...|..:.|:.|  .|| |::.......|:.....|||::|:..:...:|:||||
 Frog   395 ----------IFKPALELPEEN--EENLLVQIQDVTCYWDKTLEIPTLQNISCSVRPGELLAVIG 447

  Fly   458 PVGAGKSSLIQAILGELPGESGTLRINGSYSYAAQEPWLFTGTVRQNILFGLDWDKHRYRTVVKK 522
            |||||||||:.|:|||||.:.|.:.|.|..:|.:|:||:|:||||.|||||.::.:.:|..|::.
 Frog   448 PVGAGKSSLLSAVLGELPKDKGFVDIRGRIAYVSQQPWVFSGTVRSNILFGKEYVQEKYDKVLRV 512

  Fly   523 CALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDPLSAVDTHVGRHLFD 587
            |||::|...|..||.||:|:||.:||||||||::||||||:.||||||||||||||..||||||:
 Frog   513 CALKKDMLQLDDGDLTIIGDRGVTLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVGRHLFE 577

  Fly   588 QCMRGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLDFAQLLTAPNKDAED 652
            :|:...||.:|.||||||||:|..|..|:|:.:||:...||:..:.:||:|||.||.:..::   
 Frog   578 KCICQALRKKLCILVTHQLQYLSAAKQILILKEGRMVGKGTFQELLQSGIDFASLLKSEEEE--- 639

  Fly   653 LDEIDGAGGDGLDLLNVPSLSRRGSKNSKPSTRNNSFTSLS-------------SMAESMAQEAS 704
                             .|.|:.|....  |:||.:|:..|             ...:::|.|..
 Frog   640 -----------------QSQSQEGQLIK--SSRNRTFSQSSVWSQDSTVQSHKEGATDNLAAEPV 685

  Fly   705 LQM--QETRVEGKIGLGLYKEYLTSGSSWFMIFFMVFLCLATQILCSAADYFLSYWVDKNVDGQT 767
            |..  :|:|.||.:|..:||:|.|||||:.|:|.::.|.:.:|:.....|::||||.  |..|:.
 Frog   686 LTAIPEESRSEGTVGFKVYKKYFTSGSSYLMLFVVLLLNILSQVTYVLQDWWLSYWA--NEQGKL 748

  Fly   768 DI---------NTDPQDMY----YFAALNVAVVVFTIVRTMLFYKMAMRSSTQLHNAMYQGITRA 819
            :|         .|:..|:.    .:|.|.||.::|.::|.:|.:.:.:.::..|||.|:|.:.:|
 Frog   749 NITSGTNSTGSKTEQLDLTLYLGVYAGLTVATIIFGVLRCLLVFHVLVCAAQALHNQMFQSLLKA 813

  Fly   820 AMYFFNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIVVICITNPYYLILTLALAI 884
            .:.||:.||.||||||||||:|.||:::|...||.:|:.|.:||:|.|.....|:.||..|.|.|
 Frog   814 PVLFFDRNPIGRILNRFSKDIGHLDDLMPFTFLDFMQVLLQILGVIAVAVAVIPWILIPLLPLVI 878

  Fly   885 IFYYIREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFDNLQDLHSSGY 949
            :||::|.::|.||||:||||:..|||::||||:::.||.||||..|:|.....||..|||||..:
 Frog   879 VFYFLRRYFLDTSRDIKRLESTTRSPVFSHLSSSLQGLWTIRAFKAEKRFQDLFDAQQDLHSEAW 943

  Fly   950 YTFLATNRAFGYYLDCFCTLYIVIIILNYFINPPQ-SPGEVGLAITQAMGMTGMVQWAMRQSAEL 1013
            :.||.|:|.....||..|.::::.|.....|.... ..|:||||::..|.:.|..||.:|||||:
 Frog   944 FLFLTTSRWLAVRLDAICAVFVIAIAFGSIILAENLDAGQVGLALSYGMTIMGSFQWGVRQSAEV 1008

  Fly  1014 ENTMTAVERVVEYDEIEPEGEFDSREGKKPSPS-WPEKGEIIAEDLCLRYFPDPQAKYVLKALNF 1077
            ||.|.:.|||:||.::|.|.|::|   |.|.|: ||.||.|..|::...|..|  ...||:.||.
 Frog  1009 ENLMISAERVMEYTQLEKEAEWES---KNPPPADWPNKGMITFENVNFSYSLD--GPVVLRHLNA 1068

  Fly  1078 RIRPCEKVGIVGRTGAGKSSLINALFRLSYNEGIITIDERDTADMGLFDLRSKISIIPQEPVLFS 1142
            .|||.|||||||||||||||||.|||||:..||.|.||:..|:.:||.|||.|:||||||||||:
 Frog  1069 LIRPKEKVGIVGRTGAGKSSLIAALFRLAEPEGKIWIDKYLTSKLGLHDLRKKMSIIPQEPVLFT 1133

  Fly  1143 GSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKISEGGSNFSVGQRQLVCLARAILR 1207
            |:||.|||||:|:.|.:|||.||||:||..:.|||..:::::||.||||||||||||||||||||
 Frog  1134 GTMRKNLDPFDEHADEELWDVLEEVQLKEAVEELPGKIETQLSESGSNFSVGQRQLVCLARAILR 1198

  Fly  1208 ENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLNTIMDSDRVLVMDAGHLVEFGSP 1272
            .||:|::|||||||||:||.|||.|||.||.:|||||||||||||:|||:::|:|||.:.|:..|
 Frog  1199 RNRILIIDEATANVDPRTDELIQKTIREKFAECTVLTIAHRLNTIIDSDKIMVLDAGRVKEYDEP 1263

  Fly  1273 YELLTSSESKIFHGMVMETGQNTFDSLLKVAEKAHLESM 1311
            |.||.:.|| :|:.||.:.|:....:|.:.|::.:|:.:
 Frog  1264 YLLLQNKES-LFYKMVQQVGKAEATALNEAAKQVYLKKI 1301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 579/1303 (44%)
ABC_membrane 93..359 CDD:294371 114/269 (42%)
ABCC_MRP_domain1 422..622 CDD:213217 106/199 (53%)
ABC_membrane 735..978 CDD:294371 100/255 (39%)
ABCC_MRP_domain2 1051..1272 CDD:213211 143/220 (65%)
abcc4XP_002939329.2 PLN03130 2..1289 CDD:215595 586/1325 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 225 1.000 Domainoid score I2471
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1027 1.000 Inparanoid score I277
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm47437
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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