DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mrp4 and abcc5

DIOPT Version :9

Sequence 1:NP_650086.2 Gene:Mrp4 / 41387 FlyBaseID:FBgn0263316 Length:1316 Species:Drosophila melanogaster
Sequence 2:XP_012818083.1 Gene:abcc5 / 100125060 XenbaseID:XB-GENE-986260 Length:1437 Species:Xenopus tropicalis


Alignment Length:1380 Identity:441/1380 - (31%)
Similarity:731/1380 - (52%) Gaps:161/1380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ENPRERSSPLSSLMFCFALPVLFKGRKK-TLEQKDLYRALKEHKSDSLGDRLCAAWDEQVAKNET 74
            ::|.:.:...|.:.|.:..|:.....|| .|..:|::...|...||....||...|.|:|.:...
 Frog    99 QHPVDNAGLFSFMTFSWLTPMARIAYKKGELFFEDIWPLSKHESSDINSKRLEKLWLEEVTEKGA 163

  Fly    75 PR-------------------LGRALTKVFGFHLFITGVFLLAQEFLTKVTQPICLIGVMAYFAG 120
            ..                   :...||::.|   ||...|::  :.|.:.||.          :.
 Frog   164 DESSLRSVVWHFCRTRLIISIMCLMLTQLAG---FIGPAFVV--KSLLEYTQQ----------SS 213

  Fly   121 NDPDRSKAQLWAAGLIAGSVFSVCIGHPYMLGLLHLGMKMRIALSSLIYRKALRLSRTALGDTTV 185
            .||..|...::|. |:...|.|..:...:.|. ...|.::|.|:.::.::|.|:|..  :.:.::
 Frog   214 KDPGYSLLLVFAL-LMTEIVRSWSLALTWALN-YRTGSRLRGAVLTMAFKKILKLKN--IKEKSM 274

  Fly   186 GQVVNLLSNDVGR-FDLVLINVHYLWIAPLELIAVTYLMY--LEIGISSMFGVAIMLLFLPFQSY 247
            |:::|:.|:|..| |:...:.   ..:|...::|:..::|  :.:|.:...|.|:.:||.|...:
 Frog   275 GELINVCSSDGQRMFEAAAVG---SLLAGGPIVAILGMIYNVIILGPTGFLGSAVFILFYPAMMF 336

  Fly   248 LGKRTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWEKPFGKVVEMTRFNEMLCIKQVNYIRG 312
            :.:.|:..|.:....|||||:.|||:::.|:.||||||.|.|.:.|:..|.||...:::..|.:.
 Frog   337 VSRLTAYFRRKCVSVTDERVQKMNEVLNYIKFIKMYAWVKAFSQNVQKIRENERSILERAGYFQS 401

  Fly   313 ILISFAMFLSRIFTSSSLIAFVLLGNILNAEKAFFVTAYYNILRRSVTMFFPQGISEFAELLVSV 377
            |.:..|..:..|.:..:....::||..|.|.:||.|...:|.:..::.: .|..:...:|..||:
 Frog   402 ITVGIAPIVVVIASVLTFSVHMILGYDLTAAQAFTVVTVFNSMTFALKV-TPFSVKSLSEASVSM 465

  Fly   378 RRLEAFMHRPETKVRDKS--------KVKNANQKAESPNGD---SPKG--------NGIP----- 418
            .|.::.....|..:..|.        ::|||....::....   ||||        .|:.     
 Frog   466 DRFKSLFLMEEVHMVKKKPSSPNLIIELKNATLAWDTTYASTQCSPKGTPKLKKGKKGVKGKKEK 530

  Fly   419 -ENLIEFSQ-FQARWESH-----------------------SLEPTLEDINLQLGRRKLVAVIGP 458
             .:.||.|| ..|..:.|                       .|:..|..|:|.:.:.||:.:.|.
 Frog   531 CSHEIEGSQAVLAEQKGHLLIDSDEHPSPDEETKELPVINVKLQRALYSIDLDIEKGKLIGICGS 595

  Fly   459 VGAGKSSLIQAILGELPGESGTLRINGSYSYAAQEPWLFTGTVRQNILFGLDWDKHRYRTVVKKC 523
            ||:||:|||.||||::....|::.::||::|.||:.|:...|:|.|||||.::|:..|..|:..|
 Frog   596 VGSGKTSLISAILGQMTLLEGSIAVSGSFAYVAQQAWILNATLRDNILFGKEFDEEEYNAVLNVC 660

  Fly   524 ALERDFELLPFGDKTIVGERGASLSGGQKARISLARAVYRRADIYLLDDPLSAVDTHVGRHLFDQ 588
            .|..|..:||.||.|.:|||||:|||||:.|||||||:|....||:|||||||:|.|||.|:|:.
 Frog   661 CLRPDLAILPNGDLTEIGERGANLSGGQRQRISLARALYSDRSIYILDDPLSALDAHVGNHIFNS 725

  Fly   589 CMRGYLRSELVILVTHQLQFLEQADLIVIMDKGRISAMGTYSSMKRSGLDFA------QLLTAPN 647
            .:|.:|:|:.::.:|||||:|...|.::.|.:|.|:..||:..:.:...::|      ||..||:
 Frog   726 AIRKHLKSKTILFITHQLQYLVDCDDVIYMKEGCITERGTHEDLIKLNGEYAAIFNNFQLGDAPH 790

  Fly   648 KDAEDLDEIDGAGGDGLDLLNVPSLSRRGSKNS--KPSTRNNSFTSLSSMAESMAQEASLQMQET 710
                            ::.:|:    ::..|||  ||..:.|...|:........:|..|...|.
 Frog   791 ----------------IEQMNL----KKNLKNSLKKPLEKGNKAGSVKKEKTVKKEEGQLMQLEE 835

  Fly   711 RVEGKIGLGLYKEYLTSGSSWFMIFFMVFLCLATQILCSAA--DYFLSYWVDKNVDGQTDI---- 769
            :.:|.:...:|..|:.|....|.  |::.:.|....:.|.|  :::||||: |...|.|.:    
 Frog   836 KGKGSVPWSVYGAYIQSAGGPFA--FLIIMTLFVLNVGSTAFSNWWLSYWI-KQGSGNTTVVVHN 897

  Fly   770 --------NTDPQDMYYFAALNVAVVVFTI---VRTMLFYKMAMRSSTQLHNAMYQGITRAAMYF 823
                    ..:|..::|.|...:::||..:   ||.::|.|..:|:|::||:.:::.|.|:.|.|
 Frog   898 ETVVSNSMKDNPHVLFYTAIYALSMVVMLLLKAVRGIVFVKGTLRASSRLHDELFRRILRSPMKF 962

  Fly   824 FNTNPSGRILNRFSKDLGQLDEVLPSVMLDVVQLFLTLLGIIVVICITNPYYLILTLALAIIFYY 888
            |:|.|:||:|||||||:.::|..||......||..:.:...:.||....|::|:....|.::|..
 Frog   963 FDTTPTGRVLNRFSKDMDEVDVRLPFQAEMFVQNVILVFFCLGVISFVFPWFLVAVGPLVVLFTI 1027

  Fly   889 IREFYLKTSRDVKRLEAVARSPIYSHLSATITGLPTIRALGAQKELIAEFDNLQDLHSSGYYTFL 953
            :........|::||||.:.:||..||::::|.||.||.|.....|.:..:..|.|.:.:.:|.|.
 Frog  1028 LHVVSRVFIRELKRLENITQSPFLSHITSSIQGLTTIHAYSKGNEFLLRYQELLDNNQAPFYLFN 1092

  Fly   954 ATNRAFGYYLD-----CFCTLYIVIIILNYFINPPQSPGEVGLAITQAMGMTGMVQWAMRQSAEL 1013
            ...|.....||     ...|..::|::::..|    ||...|||::.|:.:||:.|:.:|.::|.
 Frog  1093 CAMRWLAIRLDVISVSLITTTGLMIVLMHGNI----SPAYAGLAMSYAVQLTGLFQFTVRLASET 1153

  Fly  1014 ENTMTAVERVVEYDE---IEPEGEFDSREGKKPSPSWPEKGEIIAEDLCLRYFPDPQAKYVLKAL 1075
            |...|:|||:..|.:   :|.....   :.|.|...||::|||..|:..:||  ......|||.:
 Frog  1154 EARFTSVERINHYIKTLALEAPARI---KNKAPPADWPQEGEIKFENAEMRY--RENLPLVLKKV 1213

  Fly  1076 NFRIRPCEKVGIVGRTGAGKSSLINALFRL-SYNEGIITIDERDTADMGLFDLRSKISIIPQEPV 1139
            :|.|:|.||:|||||||:||:||..||||| ..:.|.|.||....:|:||.|||||:||||||||
 Frog  1214 SFTIKPKEKIGIVGRTGSGKTSLGMALFRLVELSGGCIKIDGVKISDIGLADLRSKLSIIPQEPV 1278

  Fly  1140 LFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKISEGGSNFSVGQRQLVCLARA 1204
            ||||::|.|||||.:|::.::|||||...:|..:::||..|::::.|.|.|||||:|||:|:||.
 Frog  1279 LFSGTVRSNLDPFSQYSEEQIWDALERTHMKECVAQLPLKLETEVLENGENFSVGERQLMCIARV 1343

  Fly  1205 ILRENRVLVMDEATANVDPQTDALIQATIRSKFRDCTVLTIAHRLNTIMDSDRVLVMDAGHLVEF 1269
            :||..::|::|||||.:|.:||.|||.|||..|.:||:|||||||:|::..||::|:..|.::|:
 Frog  1344 LLRRCKILILDEATAAMDTETDLLIQETIREAFAECTMLTIAHRLHTVLSCDRIMVLAQGQVMEY 1408

  Fly  1270 GSPYELLTSSESKIF 1284
            .:|..||::..::.|
 Frog  1409 DTPSALLSNENTRFF 1423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrp4NP_650086.2 CFTR_protein 12..1277 CDD:273530 439/1370 (32%)
ABC_membrane 93..359 CDD:294371 68/268 (25%)
ABCC_MRP_domain1 422..622 CDD:213217 93/223 (42%)
ABC_membrane 735..978 CDD:294371 76/264 (29%)
ABCC_MRP_domain2 1051..1272 CDD:213211 116/221 (52%)
abcc5XP_012818083.1 PLN03130 101..1425 CDD:215595 441/1378 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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