DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr5 and LSAMP

DIOPT Version :10

Sequence 1:NP_650080.3 Gene:dpr5 / 41381 FlyBaseID:FBgn0037908 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001305844.1 Gene:LSAMP / 4045 HGNCID:6705 Length:361 Species:Homo sapiens


Alignment Length:340 Identity:72/340 - (21%)
Similarity:119/340 - (35%) Gaps:131/340 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DNTTDREVIAALGTTARLHCRVRHLGDRAVSWIRQRDLHILTIGIMTYTNDQRFLARHID----N 153
            ||.|.|:     |.||.|.|.|.....: |:|:.:.       ||:...:|:..|...::    :
Human    39 DNITVRQ-----GDTAILRCVVEDKNSK-VAWLNRS-------GIIFAGHDKWSLDPRVELEKRH 90

  Fly   154 SDEWVLKIVSVQQRDAGVYECQVST--EPKISLAYKLVVVTSKAQILANRELFIQSGSDINLTCI 216
            |.|:.|:|..|...|.|.|.|.|.|  |||.|..|.:|.|..|...::: ::.:..||::.|.|:
Human    91 SLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISS-DVTVNEGSNVTLVCM 154

  Fly   217 APQAPGP-------------------YTHML---------------------------------- 228
            |...|.|                   |..:|                                  
Human   155 ANGRPEPVITWRHLTPTGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPP 219

  Fly   229 -------------------------------WHKDTELVSDSARGGIRVESEQQMKTSNLVISRV 262
                                           |::|...::.:  .|:.::|.:..  |:|.::.|
Human   220 TITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSA--NGLEIKSTEGQ--SSLTVTNV 280

  Fly   263 QHTDSGNYTCSADN----SNSDSV-FVHIIKSEQHAAMQHELGSRL----------------LLP 306
            .....|||||.|.|    :|:..| |..::.:..|..  .|:|:.:                :..
Human   281 TEEHYGNYTCVAANKLGVTNASLVLFKRVLPTIPHPI--QEIGTTVHFKQKGPGSVRGINGSISL 343

  Fly   307 PLPLLLLAVLLVVLL 321
            .:||.|||..|:.||
Human   344 AVPLWLLAASLLCLL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr5NP_650080.3 FR1 96..113 CDD:409355 6/16 (38%)
IG_like 98..179 CDD:214653 24/86 (28%)
Ig strand A' 100..102 CDD:409355 0/1 (0%)
Ig strand B 106..114 CDD:409355 4/7 (57%)
CDR1 114..120 CDD:409355 1/5 (20%)
FR2 121..132 CDD:409355 2/10 (20%)
Ig strand C 121..127 CDD:409355 2/5 (40%)
Ig strand C' 130..133 CDD:409355 0/2 (0%)
CDR2 133..146 CDD:409355 3/12 (25%)
Ig strand D 146..151 CDD:409355 1/4 (25%)
FR3 147..176 CDD:409355 10/32 (31%)
Ig strand E 155..162 CDD:409355 2/6 (33%)
Ig strand F 170..177 CDD:409355 3/6 (50%)
IG_like 206..278 CDD:214653 23/159 (14%)
Ig strand B 211..215 CDD:409353 1/3 (33%)
Ig strand C 226..230 CDD:409353 1/68 (1%)
Ig strand E 255..259 CDD:409353 2/3 (67%)
Ig strand F 269..274 CDD:409353 4/4 (100%)
LSAMPNP_001305844.1 Ig 38..128 CDD:472250 32/101 (32%)
Ig strand B 49..53 CDD:409353 2/3 (67%)
Ig strand C 61..65 CDD:409353 1/4 (25%)
Ig strand E 94..98 CDD:409353 1/3 (33%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 1/2 (50%)
Ig_3 131..201 CDD:464046 10/70 (14%)
Ig_3 218..294 CDD:464046 13/79 (16%)

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