DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr5 and Jaml

DIOPT Version :9

Sequence 1:NP_650080.3 Gene:dpr5 / 41381 FlyBaseID:FBgn0037908 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_038938277.1 Gene:Jaml / 315610 RGDID:1562572 Length:379 Species:Rattus norvegicus


Alignment Length:297 Identity:61/297 - (20%)
Similarity:117/297 - (39%) Gaps:83/297 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 VIAALG--------TTARLHCRVRHLGDRA----------------VSWIRQRDLHI-------- 132
            |:.::|        |.:.|..|| |:|:.|                |.|:..:..|.        
  Rat    13 VLVSVGYPQGLPDLTVSSLKLRV-HVGESALMGCVVQSTEEKPVDKVDWVFSKGEHAENEYVLYY 76

  Fly   133 ---LTIGIMTYTNDQRFLARHIDNSDEWVLKIVSVQQRDAGVYECQVSTEPKISLAYKLVVVTSK 194
               |::....:.|..|.:...:.|....:|:  .||:.|.|:|.|::..:.:.|::.|.|::   
  Rat    77 YSSLSVPTGRFQNRSRLVGDLLRNDGSLLLQ--DVQKADEGIYTCEIRLKNEGSVSKKFVLL--- 136

  Fly   195 AQILAN--RELFIQSGSDINLTC-IAPQAPGPYTHMLW------HKDTELV--------SDSARG 242
             .:|..  :||.:..|..|.:.| .........|.:.|      |...|:|        |.:.:|
  Rat   137 -HVLPEEPKELRVHVGDPIQMGCFFRSTEERRVTRVNWMFSSGKHAQEEIVLSYDFNMHSGTFQG 200

  Fly   243 GIRVESEQQM------KTSNLVISRVQHTDSGNYTCSADNSNSDS---VFVHIIKSE-------- 290
            ..|..:...:      ...::::..|:.:|.|.||||......:|   :.:|:|:.|        
  Rat   201 QGRFRNRVDLTGDISRNDGSIMLQTVKKSDQGVYTCSIYLGKLESRKTIVLHVIQDESPRSISTT 265

  Fly   291 -QHAAMQHEL--GSRLL----LPPLPLLLLAVLLVVL 320
             :.|..|..:  |::|:    :....||||.||::::
  Rat   266 TETAGKQQGILDGNQLVIIVGIVCATLLLLPVLILIV 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr5NP_650080.3 V-set 95..191 CDD:284989 26/125 (21%)
IG_like 98..179 CDD:214653 23/113 (20%)
IG_like 206..278 CDD:214653 18/92 (20%)
Ig 211..278 CDD:143165 17/87 (20%)
JamlXP_038938277.1 V-set 33..139 CDD:400157 22/112 (20%)
FR2 58..69 CDD:409353 3/10 (30%)
CDR2 70..82 CDD:409353 1/11 (9%)
Ig strand C' 71..77 CDD:409353 0/5 (0%)
Ig strand C' 78..82 CDD:409353 1/3 (33%)
FR3 87..121 CDD:409353 10/35 (29%)
Ig strand D 90..96 CDD:409353 1/5 (20%)
Ig strand E 100..108 CDD:409353 2/9 (22%)
Ig strand F 115..122 CDD:409353 3/6 (50%)
V-set 141..253 CDD:400157 21/111 (19%)
Ig strand A' 144..150 CDD:409353 2/5 (40%)
Ig strand B 152..162 CDD:409353 2/9 (22%)
CDR1 162..169 CDD:409353 0/6 (0%)
Ig strand C 169..176 CDD:409353 2/6 (33%)
FR2 170..181 CDD:409353 1/10 (10%)
CDR2 182..196 CDD:409353 2/13 (15%)
Ig strand C' 183..189 CDD:409353 2/5 (40%)
Ig strand C' 191..196 CDD:409353 0/4 (0%)
FR3 204..238 CDD:409353 6/33 (18%)
Ig strand D 207..213 CDD:409353 0/5 (0%)
Ig strand E 217..225 CDD:409353 0/7 (0%)
Ig strand F 232..238 CDD:409353 4/5 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 48 1.000 Inparanoid score I5388
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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