DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr5 and Lsamp

DIOPT Version :10

Sequence 1:NP_650080.3 Gene:dpr5 / 41381 FlyBaseID:FBgn0037908 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:340 Identity:72/340 - (21%)
Similarity:118/340 - (34%) Gaps:131/340 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DNTTDREVIAALGTTARLHCRVRHLGDRAVSWIRQRDLHILTIGIMTYTNDQRFLARHID----N 153
            ||.|.|:     |.||.|.|.|.....: |:|:.:.       ||:...:|:..|...::    :
Mouse    70 DNITVRQ-----GDTAILRCVVEDKNSK-VAWLNRS-------GIIFAGHDKWSLDPRVELEKRH 121

  Fly   154 SDEWVLKIVSVQQRDAGVYECQVST--EPKISLAYKLVVVTSKAQILANRELFIQSGSDINLTCI 216
            :.|:.|:|..|...|.|.|.|.|.|  |||.|..|.:|.|..|...::: ::.:..||::.|.|:
Mouse   122 ALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISS-DVTVNEGSNVTLVCM 185

  Fly   217 APQAPGP-------------------YTHML---------------------------------- 228
            |...|.|                   |..:|                                  
Mouse   186 ANGRPEPVITWRHLTPLGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPP 250

  Fly   229 -------------------------------WHKDTELVSDSARGGIRVESEQQMKTSNLVISRV 262
                                           |::|...::.:  .|:.::|.:..  |:|.::.|
Mouse   251 TITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSA--NGLEIKSTEGQ--SSLTVTNV 311

  Fly   263 QHTDSGNYTCSADN----SNSDSV-FVHIIKSEQHAAMQHELGSRLLLPP--------------- 307
            .....|||||.|.|    :|:..| |..::.:..|..  .|:|:.:...|               
Mouse   312 TEEHYGNYTCVAANKLGVTNASLVLFKRVLPTVPHPI--QEIGTTVHFKPKGPGSVRGINGSVSL 374

  Fly   308 -LPLLLLAVLLVVLL 321
             :||.|||..|..||
Mouse   375 AVPLWLLAASLFCLL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr5NP_650080.3 FR1 96..113 CDD:409355 6/16 (38%)
IG_like 98..179 CDD:214653 23/86 (27%)
Ig strand A' 100..102 CDD:409355 0/1 (0%)
Ig strand B 106..114 CDD:409355 4/7 (57%)
CDR1 114..120 CDD:409355 1/5 (20%)
FR2 121..132 CDD:409355 2/10 (20%)
Ig strand C 121..127 CDD:409355 2/5 (40%)
Ig strand C' 130..133 CDD:409355 0/2 (0%)
CDR2 133..146 CDD:409355 3/12 (25%)
Ig strand D 146..151 CDD:409355 1/4 (25%)
FR3 147..176 CDD:409355 9/32 (28%)
Ig strand E 155..162 CDD:409355 2/6 (33%)
Ig strand F 170..177 CDD:409355 3/6 (50%)
IG_like 206..278 CDD:214653 23/159 (14%)
Ig strand B 211..215 CDD:409353 1/3 (33%)
Ig strand C 226..230 CDD:409353 1/68 (1%)
Ig strand E 255..259 CDD:409353 2/3 (67%)
Ig strand F 269..274 CDD:409353 4/4 (100%)
LsampXP_030104997.1 Ig 69..159 CDD:472250 31/101 (31%)
Ig strand B 80..84 CDD:409353 2/3 (67%)
Ig strand C 92..96 CDD:409353 1/4 (25%)
Ig strand E 125..129 CDD:409353 1/3 (33%)
Ig strand F 139..144 CDD:409353 2/4 (50%)
Ig strand G 152..155 CDD:409353 1/2 (50%)
Ig_3 162..232 CDD:464046 10/70 (14%)
Ig_3 249..325 CDD:464046 13/79 (16%)

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