DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr5 and CADM4

DIOPT Version :9

Sequence 1:NP_650080.3 Gene:dpr5 / 41381 FlyBaseID:FBgn0037908 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_660339.1 Gene:CADM4 / 199731 HGNCID:30825 Length:388 Species:Homo sapiens


Alignment Length:187 Identity:49/187 - (26%)
Similarity:80/187 - (42%) Gaps:25/187 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 VIAALGTTARLHCRVRHLGDRAVSWIRQRDLHILTIGIMTYTNDQRFLARHIDNSDEWVLKIVSV 164
            |..|.|..|.:.||: |..|.::..|:......|.........|:||      ..:|:..:.|.:
Human    32 VTVAEGGVAEITCRL-HQYDGSIVVIQNPARQTLFFNGTRALKDERF------QLEEFSPRRVRI 89

  Fly   165 QQRDA-----GVYECQVSTE-PKISLAYKLVVVTSKAQILANRELFIQSGSDINLTCIAPQAPGP 223
            :..||     |.|.||:.|| ....:|...|:|..:..::..||..:: |.::.|:|:.|:: .|
Human    90 RLSDARLEDEGGYFCQLYTEDTHHQIATLTV
LVAPENPVVEVREQAVE-GGEVELSCLVPRS-RP 152

  Fly   224 YTHMLWHKD-TEL--VSDSARGGIRVESEQQMKTSNLVISRVQHTDSGN-YTCSADN 276
            ...:.|::| .||  ||.|...|      :....::.|..||...|.|. ..|.|.|
Human   153 AATLRWYRDRKELKGVSSSQENG------KVWSVASTVRFRVDRKDDGGIIICEAQN 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr5NP_650080.3 V-set 95..191 CDD:284989 25/96 (26%)
IG_like 98..179 CDD:214653 21/83 (25%)
IG_like 206..278 CDD:214653 21/75 (28%)
Ig 211..278 CDD:143165 20/70 (29%)
CADM4NP_660339.1 Ig 29..120 CDD:416386 24/94 (26%)
FR1 29..45 CDD:409353 4/12 (33%)
Ig strand A' 30..36 CDD:409353 1/3 (33%)
Ig strand B 38..46 CDD:409353 2/7 (29%)
CDR1 46..51 CDD:409353 1/5 (20%)
FR2 52..59 CDD:409353 1/6 (17%)
Ig strand C 52..58 CDD:409353 1/5 (20%)
CDR2 60..71 CDD:409353 1/10 (10%)
Ig strand C' 62..66 CDD:409353 1/3 (33%)
Ig strand C' 68..71 CDD:409353 0/2 (0%)
FR3 72..107 CDD:409353 11/40 (28%)
Ig strand D 76..83 CDD:409353 3/12 (25%)
Ig strand E 86..92 CDD:409353 1/5 (20%)
Ig strand F 99..107 CDD:409353 4/7 (57%)
CDR3 108..111 CDD:409353 2/2 (100%)
Ig strand G 111..120 CDD:409353 1/8 (13%)
FR4 113..120 CDD:409353 1/6 (17%)
IgI_2_Necl-4 121..220 CDD:409468 24/91 (26%)
Ig strand B 141..145 CDD:409468 1/3 (33%)
Ig strand C 155..159 CDD:409468 0/3 (0%)
Ig strand E 182..186 CDD:409468 1/3 (33%)
Ig strand F 196..201 CDD:409468 1/4 (25%)
Ig strand G 213..216 CDD:409468
Ig_3 224..295 CDD:404760
Ig strand A' 231..235 CDD:409353
Ig strand B 241..248 CDD:409353
Ig strand C 255..260 CDD:409353
Ig strand C' 262..264 CDD:409353
Ig strand E 274..280 CDD:409353
Ig strand F 287..294 CDD:409353
Ig strand G 300..308 CDD:409353
4.1m 344..362 CDD:128590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I5236
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

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