DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr5 and dscam

DIOPT Version :9

Sequence 1:NP_650080.3 Gene:dpr5 / 41381 FlyBaseID:FBgn0037908 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_031751619.1 Gene:dscam / 100216449 XenbaseID:XB-GENE-921689 Length:2039 Species:Xenopus tropicalis


Alignment Length:219 Identity:54/219 - (24%)
Similarity:87/219 - (39%) Gaps:48/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 REVIAALGTTARLHCRVRHLGDRAVSWIRQRDLHILTIGIMTYTNDQRFLARHIDNSDEWVLKIV 162
            :.:.|..|....:||||......::.|.:..:|             ..|..|.:...:...||:.
 Frog   511 KNITAIAGRDTYIHCRVIGYPYYSIKWYKNSNL-------------LPFNHRQVAFENNGTLKLS 562

  Fly   163 SVQQR-DAGVYECQVSTEPKISLAYKLVVVTSKAQILANRELFIQS--------GSDINLTCIAP 218
            .||:. |.|.|.|.|..:|::|.: :.|.||.|.      ..|||.        |..:.:.|:..
 Frog   563 DVQKDVDEGEYMCNVLVQPQLSTS-QSVHVTV
KV------PPFIQPFESQRFSIGQRVFIPCVVV 620

  Fly   219 QAPGPYTHMLWHKDTELVSDSARGGIRVESEQQMKTSNLVISRVQHTDSGNYTCSADNSNSDSVF 283
            ....|.| :.|.||...:..|.  |:.:::..  .||:|.||.:....:|||||.|.|       
 Frog   621 SGDLPIT-ITWQKDGRPIPASL--GVTIDNID--FTSSLRISNLSLMHNGNYTCIARN------- 673

  Fly   284 VHIIKSEQHAAMQHELGSRLLLPP 307
                   ..||::|:....:.:||
 Frog   674 -------DAAAVEHQSQLIVRVPP 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr5NP_650080.3 V-set 95..191 CDD:284989 22/93 (24%)
IG_like 98..179 CDD:214653 19/81 (23%)
IG_like 206..278 CDD:214653 22/79 (28%)
Ig 211..278 CDD:143165 20/66 (30%)
dscamXP_031751619.1 Ig 26..121 CDD:416386
Ig strand A' 33..37 CDD:409353
Ig strand B 40..49 CDD:409353
Ig strand C 55..61 CDD:409353
Ig strand C' 63..66 CDD:409353
Ig strand D 72..75 CDD:409353
Ig strand E 80..85 CDD:409353
Ig strand F 98..106 CDD:409353
Ig strand G 109..121 CDD:409353
Ig 124..217 CDD:416386
Ig strand A' 127..136 CDD:409353
Ig strand B 140..147 CDD:409353
Ig strand C 157..162 CDD:409353
Ig strand C' 164..167 CDD:409353
Ig strand D 172..176 CDD:409353
Ig strand E 179..185 CDD:409353
Ig strand F 193..201 CDD:409353
Ig strand G 205..217 CDD:409353
Ig strand A 225..228 CDD:409353
Ig strand A' 234..237 CDD:409353
IG_like 236..310 CDD:214653
Ig strand B 242..249 CDD:409353
Ig strand C 255..260 CDD:409353
Ig strand C' 262..264 CDD:409353
Ig strand D 270..274 CDD:409353
Ig strand E 276..280 CDD:409353
Ig strand F 289..297 CDD:409353
Ig strand G 300..310 CDD:409353
Ig 313..395 CDD:416386
Ig strand A 314..319 CDD:409353
Ig strand A' 322..326 CDD:409353
Ig strand B 329..339 CDD:409353
Ig strand C 344..350 CDD:409353
Ig strand C' 351..354 CDD:409353
Ig strand E 368..374 CDD:409353
Ig strand F 381..389 CDD:409353
Ig 406..501 CDD:416386
Ig strand A 406..409 CDD:409353
Ig strand A' 415..419 CDD:409353
Ig strand B 422..431 CDD:409353
Ig strand C 436..442 CDD:409353
Ig strand C' 444..447 CDD:409353
Ig strand D 452..460 CDD:409353
Ig strand E 464..473 CDD:409353
Ig strand F 480..488 CDD:409353
Ig strand G 491..501 CDD:409353
Ig 504..593 CDD:416386 23/95 (24%)
Ig strand A 505..507 CDD:409353
Ig strand A' 512..516 CDD:409353 0/3 (0%)
Ig strand B 519..526 CDD:409353 1/6 (17%)
Ig strand C 533..539 CDD:409353 1/5 (20%)
Ig strand C' 540..542 CDD:409353 0/1 (0%)
Ig strand D 549..553 CDD:409353 1/3 (33%)
Ig strand E 557..563 CDD:409353 2/5 (40%)
Ig strand F 571..579 CDD:409353 4/7 (57%)
Ig strand G 583..593 CDD:409353 3/10 (30%)
Ig 596..686 CDD:416386 27/108 (25%)
Ig strand A 597..599 CDD:409353 0/1 (0%)
Ig strand A' 604..608 CDD:409353 0/3 (0%)
Ig strand B 611..620 CDD:409353 1/8 (13%)
Ig strand C 625..632 CDD:409353 3/7 (43%)
Ig strand C' 634..636 CDD:409353 0/1 (0%)
Ig strand D 643..648 CDD:409353 0/4 (0%)
Ig strand E 651..658 CDD:409353 4/6 (67%)
Ig strand F 665..673 CDD:409353 6/7 (86%)
Ig strand G 676..685 CDD:409353 3/8 (38%)
Ig_DSCAM 689..784 CDD:409397 2/2 (100%)
Ig strand B 707..711 CDD:409397
Ig strand C 720..724 CDD:409397
Ig strand E 749..753 CDD:409397
Ig strand F 763..768 CDD:409397
Ig strand G 777..780 CDD:409397
Ig_DSCAM 785..885 CDD:409398
Ig strand B 805..809 CDD:409398
Ig strand C 818..822 CDD:409398
Ig strand E 849..853 CDD:409398
Ig strand F 863..868 CDD:409398
Ig strand G 876..879 CDD:409398
FN3 886..980 CDD:238020
FN3 987..1084 CDD:238020
FN3 1093..1185 CDD:238020
FN3 1190..1279 CDD:238020
Ig_3 <1303..1364 CDD:404760
Ig strand B 1304..1311 CDD:409353
Ig strand C 1317..1322 CDD:409353
Ig strand C' 1327..1333 CDD:409353
Ig strand D 1337..1341 CDD:409353
Ig strand E 1343..1347 CDD:409353
Ig strand F 1356..1364 CDD:409353
Ig strand G 1367..1377 CDD:409353
FN3 1381..1471 CDD:238020
FN3 1497..1568 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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