DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LB and pglyrp1

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_012823786.1 Gene:pglyrp1 / 548492 XenbaseID:XB-GENE-491319 Length:214 Species:Xenopus tropicalis


Alignment Length:161 Identity:69/161 - (42%)
Similarity:93/161 - (57%) Gaps:1/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LLSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYS 119
            :|:::.||.|..........|.|||||||: ..|.|.|...|:...:.:|::|.....|.|:|||
 Frog    53 ILTKAQWGGRAATCRTAMTTPVPYVIIHHT-AGAHCSSQTSCISQAKSIQNYHMNSNAWCDVGYS 116

  Fly   120 FGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLIAFGVFKGYID 184
            |.:|.||.:|.|||:|.:|||||.||..|:||.::|.:....|.....:|.||||:.||.||||.
 Frog   117 FLVGEDGNVYEGRGWNSVGAHAPNYNSNSIGISVMGTYTNINPNTAAQNAVKNLISCGVTKGYIK 181

  Fly   185 PAYKLLGHRQVRDTECPGGRLFAEISSWPHF 215
            ..|.|.|||.|..|||||...:..:.:||.|
 Frog   182 STYILKGHRNVGSTECPGNTFYNTVKTWPRF 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 60/139 (43%)
pglyrp1XP_012823786.1 PGRP 51..192 CDD:128941 60/139 (43%)

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