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Protein Alignment PGRP-LB and PGRP-SC1b
DIOPT Version :9
Sequence 1: | NP_001247052.1 |
Gene: | PGRP-LB / 41379 |
FlyBaseID: | FBgn0037906 |
Length: | 255 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001286209.1 |
Gene: | PGRP-SC1b / 35861 |
FlyBaseID: | FBgn0033327 |
Length: | 185 |
Species: | Drosophila melanogaster |
Alignment Length: | 182 |
Identity: | 70/182 - (38%) |
Similarity: | 102/182 - (56%) |
Gaps: | 15/182 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 SQHMQQANLGDGVATARLLSRSDWGARLPKSVEHFQGPAPYVIIHH---SYMPAVCYSTPDCMKS 99
||:|.| || .::|:::||.|..|..........|.|||| || |.:...|...
Fly 15 SQYMAQ-----GV---YVVSKAEWGGRGAKWTVGLGNYLSYAIIHHTAGSY----CETRAQCNAV 67
Fly 100 MRDMQDFHQLERGWNDIGYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPK 164
::.:|::|....||.||||:|.|||||.:|.|||:|.:||||.::|..|:||..:|::..:....
Fly 68 LQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSIGISFLGNYNWDTLEP 132
Fly 165 QMLDAAKNLIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFT 216
.|:.||:.|:...|.:|.:...|.|.|||||..|||||..::.||..|.|::
Fly 133 NMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGWSHWS 184
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LB | NP_001247052.1 |
PGRP |
53..195 |
CDD:128941 |
53/144 (37%) |
PGRP-SC1b | NP_001286209.1 |
PGRP |
22..163 |
CDD:128941 |
54/147 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2CMNT |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm26632 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.810 |
|
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