powered by:
Protein Alignment PGRP-LB and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_001247052.1 |
Gene: | PGRP-LB / 41379 |
FlyBaseID: | FBgn0037906 |
Length: | 255 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 184 |
Identity: | 66/184 - (35%) |
Similarity: | 96/184 - (52%) |
Gaps: | 6/184 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 SCGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMK 98
:|...||.:... .|...:..||.|.|| .........||.:|||.|:...: |..:.||:.
Mouse 182 TCLVPQHSEIPK----KACPNITPRSAWEAR-ETHCPQMNLPAKFVIIIHTAGKS-CNESADCLV 240
Fly 99 SMRDMQDFHQLERGWNDIGYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPP 163
.:||.|.||...:.:.||.|.|.:|.||.:|.|.|:|:.|:|...|||.::||..:|::..:.|.
Mouse 241 RVRDTQSFHIDNQDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPN 305
Fly 164 KQMLDAAKNLIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTH 217
:..|.||::||...|.|||:...|.|:||..|.:...||..|:..|.:||||.|
Mouse 306 EASLKAAQSLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHFKH 359
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LB | NP_001247052.1 |
PGRP |
53..195 |
CDD:128941 |
52/141 (37%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
52/141 (37%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R9951 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
4 | 3.800 |
|
Return to query results.
Submit another query.