DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LB and Pglyrp3

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_006501534.1 Gene:Pglyrp3 / 242100 MGIID:2685266 Length:359 Species:Mus musculus


Alignment Length:184 Identity:66/184 - (35%)
Similarity:96/184 - (52%) Gaps:6/184 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SCGYSQHMQQANLGDGVATARLLSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMK 98
            :|...||.:...    .|...:..||.|.|| .........||.:|||.|:...: |..:.||:.
Mouse   182 TCLVPQHSEIPK----KACPNITPRSAWEAR-ETHCPQMNLPAKFVIIIHTAGKS-CNESADCLV 240

  Fly    99 SMRDMQDFHQLERGWNDIGYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPP 163
            .:||.|.||...:.:.||.|.|.:|.||.:|.|.|:|:.|:|...|||.::||..:|::..:.|.
Mouse   241 RVRDTQSFHIDNQDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPN 305

  Fly   164 KQMLDAAKNLIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHFTH 217
            :..|.||::||...|.|||:...|.|:||..|.:...||..|:..|.:||||.|
Mouse   306 EASLKAAQSLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHFKH 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 52/141 (37%)
Pglyrp3XP_006501534.1 PGRP 40..172 CDD:128941
PGRP 197..337 CDD:128941 52/141 (37%)
Blue background indicates that the domain is not in the aligned region.

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