DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-LB and PGRP-LB

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_061504293.1 Gene:PGRP-LB / 1281956 VectorBaseID:AGAMI1_002833 Length:205 Species:Anopheles gambiae


Alignment Length:165 Identity:106/165 - (64%)
Similarity:123/165 - (74%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGYSF 120
            ::|..|.|..||.:|||.||.|||||||||.||.||:...|:.:|:.||..||.||.||||||||
Mosquito    34 VTRDFWSALPPKRIEHFAGPIPYVIIHHSYRPAACYNGLQCIAAMQSMQKMHQDERQWNDIGYSF 98

  Fly   121 GIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLIAFGVFKGYIDP 185
            .:||||.:|.||||||||||||:||::||||.|||||..:||||.||.||:|||.:||..|.|..
Mosquito    99 AVGGDGRVYQGRGFNVIGAHAPRYNNRSVGICLIGDWVADLPPKNMLTAAQNLIEYGVRNGLIAK 163

  Fly   186 AYKLLGHRQVRDTECPGGRLFAEISSWPHFTHIND 220
            .|.||||||||.|||||.|||.||.:||||..:.|
Mosquito   164 NYTLLGHRQVRTTECPGDRLFEEIKTWPHFDPMTD 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 88/138 (64%)
PGRP-LBXP_061504293.1 None

Return to query results.
Submit another query.