DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LB and LOC1276948

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_316360.1 Gene:LOC1276948 / 1276948 VectorBaseID:AGAMI1_001325 Length:188 Species:Anopheles gambiae


Alignment Length:162 Identity:72/162 - (44%)
Similarity:99/162 - (61%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RLLSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGY 118
            |:::|:.||||...:.:....|||:|::||: ..|.|.:...|.:.||::|.||....||.||||
Mosquito    24 RIVTRAQWGARAASTSQLPIRPAPWVVMHHT-AGASCTTDAACAQQMRNIQSFHMDGNGWADIGY 87

  Fly   119 SFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLIAFGVFKGYI 183
            :|.:|.:|..|.|||:...|||||.|||:|||:.:||.:...:|......||:|||..||..|:|
Mosquito    88 NFLVGENGAAYEGRGWGRQGAHAPGYNDRSVGMGVIGTFTNAIPNAAARTAARNLITCGVSLGHI 152

  Fly   184 DPAYKLLGHRQVRDTECPGGRLFAEISSWPHF 215
            ...|.|:||||...|.|||...|.||.:||.|
Mosquito   153 ASNYWLIGHRQAVATACPGNAFFNEIRTWPRF 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 61/140 (44%)
LOC1276948XP_316360.1 PGRP 23..163 CDD:128941 60/139 (43%)

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