DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LB and LOC1276947

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_316359.1 Gene:LOC1276947 / 1276947 VectorBaseID:AGAMI1_013240 Length:188 Species:Anopheles gambiae


Alignment Length:162 Identity:71/162 - (43%)
Similarity:100/162 - (61%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RLLSRSDWGARLPKSVEHFQGPAPYVIIHHSYMPAVCYSTPDCMKSMRDMQDFHQLERGWNDIGY 118
            |:::|:.||||...:.:....|||:|::||: ..|.|.:...|.:.||::|.||....||.||||
Mosquito    24 RIVTRAQWGARAANTAQLPIRPAPWVVMHHT-AGAACTTDAACAQQMRNIQSFHMDGNGWADIGY 87

  Fly   119 SFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRTELPPKQMLDAAKNLIAFGVFKGYI 183
            :|.:|.:|..|.|||:...|||||.|||:|||:.:||.:...:|.....:||:.||:.||..|:|
Mosquito    88 NFLVGENGAAYEGRGWGRQGAHAPGYNDRSVGMGVIGTFTNGIPNAAARNAAQQLISCGVSLGHI 152

  Fly   184 DPAYKLLGHRQVRDTECPGGRLFAEISSWPHF 215
            ...|.|:||||...|.|||...|.||.:||.|
Mosquito   153 ASNYWLIGHRQAVATACPGNAFFNEIRNWPRF 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 60/140 (43%)
LOC1276947XP_316359.1 PGRP 23..163 CDD:128941 59/139 (42%)

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