DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LB and pglyrp2

DIOPT Version :10

Sequence 1:NP_001247052.1 Gene:PGRP-LB / 41379 FlyBaseID:FBgn0037906 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001106487.2 Gene:pglyrp2 / 100127677 XenbaseID:XB-GENE-5779913 Length:497 Species:Xenopus tropicalis


Alignment Length:187 Identity:77/187 - (41%)
Similarity:100/187 - (53%) Gaps:13/187 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QQANLGDGVATAR----------LLSRSDWGARLPKSVEHFQG-PAPYVIIHHSYMPA-VCYSTP 94
            :|..:..|.|...          ::.|..|||:..|....|.| |...|.|||:|.|: .|.|..
 Frog   308 EQIKIAAGAAAREFEQYFLDCPAVIPRCMWGAKRYKGKPIFLGLPLSRVFIHHTYEPSQPCTSFS 372

  Fly    95 DCMKSMRDMQDFHQLERGWNDIGYSFGIGGDGMIYTGRGFNVIGAHAPKYNDKSVGIVLIGDWRT 159
            .|..:||.||.|||.:|||:||||||.:|.:|.:|.|||:|..|||...||....|:..|||:.:
 Frog   373 QCAANMRSMQRFHQQDRGWDDIGYSFVVGSNGYLYEGRGWNRAGAHTRGYNSVGYGVSFIGDYTS 437

  Fly   160 ELPPKQMLDAAKN-LIAFGVFKGYIDPAYKLLGHRQVRDTECPGGRLFAEISSWPHF 215
            .:|...:|...|: .:...|..|||.|.|.:.|||||..|.|||..|:.||.||.||
 Frog   438 IVPKDSILALVKDRFLRCAVRLGYITPNYIIQGHRQVVSTSCPGDALYKEIQSWDHF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LBNP_001247052.1 PGRP 53..195 CDD:128941 61/154 (40%)
pglyrp2NP_001106487.2 PGRP 329..474 CDD:128941 61/144 (42%)

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