DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17230 and tchp

DIOPT Version :10

Sequence 1:NP_650077.1 Gene:CG17230 / 41376 FlyBaseID:FBgn0046225 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001035433.1 Gene:tchp / 678595 ZFINID:ZDB-GENE-060421-3368 Length:499 Species:Danio rerio


Alignment Length:544 Identity:123/544 - (22%)
Similarity:226/544 - (41%) Gaps:113/544 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLNHQHAAYAHRMEQEHNRVQATQAVNSYYSHWGKVTSRFENWTNKEYYEKADQQLQSRRDQQEK 68
            |...|.|....:.|| |::....|.|.|         |:...|::::.:.::....|..|.::||
Zfish    23 RQREQEARLRRQWEQ-HSQYFREQDVRS---------SKQAQWSSRQSFHRSMSAFQRDRMREEK 77

  Fly    69 EAALNERRSRLRQLLASESEEYNNEMERRRRPREPGGGDL--QMLDRVNQSLKEQEQLRRKLEME 131
            :..|.|||.|||.:|    :|..:::|...|...|....|  |::::.:.....:|:.|:.|..|
Zfish    78 QRKLEERRERLRTML----QEERDQLEAELRNIHPDRDTLARQLVEKTDALRSAREERRKNLAQE 138

  Fly   132 AKLYGRWRHGVDDEKLLYQSKSDNEVLAKL-----------NWLDRQIESQQQREEQQALAAERQ 185
            . |...|             |.:|..|.|:           .|   |::.|::::..:....|:|
Zfish   139 L-LREHW-------------KQNNSQLRKVESELHKDHIVSQW---QVQQQEKKQADERTQEEKQ 186

  Fly   186 LLLQQEISRTEQAQKERQQIREQQLR--ELRALQE--SHMSELRLRQQEADKLKEEEQHFQLFLG 246
             ..:.|..||.|...||.:..|:..:  |.:..:|  ..|.||:||:|||::||:|::.......
Zfish   187 -RFENEYERTRQEALERMRKEEENRKWEEKKRAEELLKQMEELKLREQEAERLKQEQETLMSKRW 250

  Fly   247 ELDK---ERELLEESSALVLKQVDSG------HAFNLKKIKVFIRQRSEASRKQISLCI------ 296
            ||:|   ||:::|||.    ::.:.|      :...||:....:::..||.||.::..:      
Zfish   251 ELEKLEDERKMMEESR----RKTEFGRFLTRQYRAQLKRRAQQVQEELEADRKILAALLEGELDE 311

  Fly   297 NMLH--RMAKYVVKTEELKTLLDKYRSQLENEELACAQIESMYESEAKYNLQRSEENWREQHLQR 359
            ...|  |..:.|.....:|.:::: :.|||.|..  |:.:.:|..||:...::.|..|.::...|
Zfish   312 QRFHKARRERAVADAAWMKRVIEE-QLQLERERE--AEFDILYREEAQRVWEKREAEWEKERRAR 373

  Fly   360 YGELSKFIDQEKDCLGAMLQENVSQQQTLVELRSQHLTGIEQ-------ANKQLEQLSQVQADEV 417
            ...:.:.:...:..|...:|||...::..::.|.:.|..:||       ..:|.|.|...:..|:
Zfish   374 ERLMREVLAGRQQQLQERMQENRLAREESLQRREELLQQLEQDRLTLRLEKEQQEGLRTARIQEI 438

  Fly   418 PAPSQSNLKEV-ESQSSVSETSVEENLLPKVSDSFSNLNLDVWKDLPPARSEVDMQ----RLNQS 477
            ....:...||. |.|.::.:...:|                        |.|:.:|    ||...
Zfish   439 DNQVEQRRKEQWEQQQTLEQEEAQE------------------------REELRLQEEELRLETD 479

  Fly   478 RSLSVVTSQTAAPPKFARKRVAWT 501
            |.:    .|.......:|.|.|||
Zfish   480 RMI----RQGFQERIHSRPRSAWT 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17230NP_650077.1 EnvC 53..>260 CDD:443969 61/226 (27%)
Smc <158..>427 CDD:440809 69/307 (22%)
tchpNP_001035433.1 DUF5401 <12..236 CDD:375164 60/244 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..78 7/40 (18%)
Interaction with keratin proteins. /evidence=ECO:0000250|UniProtKB:Q9BT92 74..499 108/481 (22%)
TPH 144..484 CDD:464007 83/391 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..209 10/40 (25%)
Trichohyalin/plectin homology domain. /evidence=ECO:0000250|UniProtKB:Q9BT92 260..426 33/172 (19%)

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