DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5281 and rhaT

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_418343.1 Gene:rhaT / 948398 ECOCYCID:EG11313 Length:344 Species:Escherichia coli


Alignment Length:224 Identity:45/224 - (20%)
Similarity:79/224 - (35%) Gaps:81/224 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 TLFNVLTINMTLLGVVLITRPPFVFGDTAESE-DVAGKTYDI-WGPVAAISSTLFGANVYILLRA 212
            ||..||   :.|:||.::||.    |...|.: .:..:.::: .|.|.|:...:|.|.:...:.|
E. coli   137 TLLGVL---VALIGVGIVTRA----GQLKERKMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNA 194

  Fly   213 LKNLHFSVIMTNFGTIALVYTLIVCASIGA----VCWPSCGRDRWLVVVLGVFSFLGQILLTLSL 273
            .|.:|.:                 .|::|.    |..||      .||::|     |..::.|..
E. coli   195 AKPMHEA-----------------AAALGVDPLYVALPS------YVVIMG-----GGAIINLGF 231

  Fly   274 QIEQAGPVAIARCADI---------------------VFAFVWQMLFF------GETPTAYSLVG 311
            ..     :.:|:..|:                     :...:|.:.||      ...|..|..:.
E. coli   232 CF-----IRLAKVKDLSLKADFSLAKSLIIHNVLLSTLGGLMWYLQFFFYAWGHARIPAQYDYIS 291

  Fly   312 AVMVM------GSVVLTALKKW--AGTLP 332
            .::.|      |.:|...||:|  ||..|
E. coli   292 WMLHMSFYVLCGGIVGLVLKEWNNAGRRP 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 40/214 (19%)
rhaTNP_418343.1 RhaT 1..343 CDD:302813 45/224 (20%)

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