DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5281 and UTR3

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_563949.1 Gene:UTR3 / 837998 AraportID:AT1G14360 Length:331 Species:Arabidopsis thaliana


Alignment Length:151 Identity:31/151 - (20%)
Similarity:56/151 - (37%) Gaps:19/151 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VAGKTYDIWGPV-------AAISSTLFGANVYILLRALKNLHFSVIMTNFGTIALVYTLIVCASI 240
            |||    ||...       ..:|:..||.:.    :..::|.|..:..|...:...|.:|...|.
plant    18 VAG----IWAAYIYQGILQETLSTKKFGEDG----KRFEHLAFLNLAQNVICLVWSYIMIKLWSN 74

  Fly   241 GAVCWPSCGRDRWLVVVLGVFSFLGQILLTLSLQIEQAGPVAIARCADIVFAFVWQMLFFGETPT 305
            |.    |.|...|.....|:.:.:|..:...:|:........:|:.:.::...:...|.:|...|
plant    75 GG----SGGAPWWTYWSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGSLVYGIRYT 135

  Fly   306 AYSLVGAVMVMGSVVLTALKK 326
            ....:...:|.|.|.:.||.|
plant   136 LPEYLCTFLVAGGVSMFALLK 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 30/149 (20%)
UTR3NP_563949.1 UAA 16..318 CDD:462479 31/151 (21%)

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