DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5281 and AT3G59340

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001325484.1 Gene:AT3G59340 / 825103 AraportID:AT3G59340 Length:360 Species:Arabidopsis thaliana


Alignment Length:298 Identity:63/298 - (21%)
Similarity:112/298 - (37%) Gaps:55/298 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LGILLATL-SSLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVILL 101
            ||.:|:.| :|..|:...:..||:.........|:..:.|:...  |::|.|..:  :||.....
plant    49 LGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGG--IMLYRRPTI--KGKWYHYF 109

  Fly   102 LRCFMGTTGLMLSFYAFRHMPLADASVI-IFSTPVFVAIFARAFLKEPCTLFNVLTINMTLLGVV 165
            |...:...|..|...|.::..:....:: .::.|. |.:....|||....|..:..:.:.:.|||
plant   110 LLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPC-VLVLTWMFLKTKYRLMKISGVFICIAGVV 173

  Fly   166 LITRPPFVFGDTAESEDVAGKTYDIWGPVAAISSTLFGANVYILLRALKNLHFSVIMTNFGTIAL 230
            ::     :|.|........|.     .||......|.||.:|    |:.|.....::.|..|:. 
plant   174 MV-----LFSDVHAGSRAGGS-----NPVKGDFLVLAGATLY----AVSNTTEEFLVKNADTVE- 223

  Fly   231 VYTLIVCASIGAVCWPSCGRDRWLVVVLGVFSFLGQILLTLSLQIEQAGPV-AIARCADIVFAF- 293
                                   |:..:|:|   |.|:..:.:.|.:.|.: ||...||.||.| 
plant   224 -----------------------LMTFMGLF---GAIISAIQVAIFEQGELKAIHWSADAVFPFL 262

  Fly   294 ---VWQMLFFGETPTAYSLVGAVMVMGSVVLTALKKWA 328
               :...||:...|......|:.|...|::.:.:  ||
plant   263 RFAITMFLFYSLLPILLRTNGSTMFTLSLLTSDM--WA 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 61/294 (21%)
AT3G59340NP_001325484.1 SLC35F 39..330 CDD:283644 63/298 (21%)

Return to query results.
Submit another query.