DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5281 and AT3G59330

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001326725.1 Gene:AT3G59330 / 825102 AraportID:AT3G59330 Length:257 Species:Arabidopsis thaliana


Alignment Length:233 Identity:56/233 - (24%)
Similarity:95/233 - (40%) Gaps:46/233 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LGILLATLS---------------SLFFSLCSVIVKGLVDVNPMEL-------ASFRFVGVLLPA 80
            ||.:|:.||               |.||.....|.|...::...|:       .|..|:|.:|.|
plant    20 LGQILSLLSTSLSFTSSEIARKDFSFFFFSNHPIFKHSHELTKFEIFIGINAPTSQSFLGYVLLA 84

  Fly    81 L---PILIYTRQPVFPEGKRVILLLRCFMGTTGLMLSFYAFRHMPLADASVI-IFSTPVFVAIFA 141
            :   .|::|.|..:    |....||..|:......|...|:::..:....:: .::.|. |.:|.
plant    85 IVYGGIMLYRRSAI----KWYHYLLLAFVDVEANFLVVKAYQNTSMTSVMLLDCWAIPC-VLVFT 144

  Fly   142 RAFLKEPCTLFNVLTINMTLLGVVLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISSTLFGANV 206
            ..|||....|..:..:.:..:|||::     ||.| ..:.|.||.:..|.|....|:    ||.:
plant   145 WVFLKTKYRLMKISGVVICNVGVVMV-----VFSD-VHAGDRAGGSNPIKGDFLVIA----GATL 199

  Fly   207 YILLRALKNLHFSVIMTNFGTIALVYTL-IVCASIGAV 243
            |    |:.|:....::.|...:.|:..| :..|.|||:
plant   200 Y----AVSNVSQEFLVKNADRVQLMSLLGLFGAIIGAI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 56/233 (24%)
AT3G59330NP_001326725.1 SLC35F 10..>238 CDD:283644 56/233 (24%)

Return to query results.
Submit another query.