DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5281 and UTR5

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_190204.2 Gene:UTR5 / 823761 AraportID:AT3G46180 Length:347 Species:Arabidopsis thaliana


Alignment Length:328 Identity:68/328 - (20%)
Similarity:122/328 - (37%) Gaps:86/328 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SLFFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVILLLRCFMGTTGL 111
            |||...|:.:....|....: |||.:   ||.|..|:..|                 |.:..|.:
plant    56 SLFLVFCNRLTTSAVSAAAL-LASKK---VLDPVAPVYKY-----------------CLISVTNI 99

  Fly   112 M--------LSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVLTINMTLLGV-VLI 167
            :        |.:.:|....||..:.:|   ||.|  :....:::....|:.|...:..||. |.|
plant   100 LTTTCQYEALKYVSFPVQTLAKCAKMI---PVMV--WGTLIMQKKYRGFDYLVAFLVTLGCSVFI 159

  Fly   168 TRPPFVFGDTAESEDVA----GKTYDIWGP------------VAAISSTLF-GANVYILLRALKN 215
            ..|.   ||     |::    |:...:||.            .:.....|| |.|:        .
plant   160 LFPA---GD-----DISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLFKGYNM--------E 208

  Fly   216 LHFSVIMTNFGTIALVYTLIVCAS--IGAVCWPSCGRD-RWLVVVLGVFSFLGQILLTLSLQ--- 274
            :|..:..|...:..|.:|.::...  :.||.:.|..|| .:.:.:|...:...|..::.:::   
plant   209 IHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVATASQFFISYTIRTFG 273

  Fly   275 -IEQAGPVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSV-VLTALKK------WAGTL 331
             :..|..:...:.|.|:.:.:|    |....:....:|:|:|.||: ..|.:||      .|..|
plant   274 ALTFAAIMTTRQLASIMLSCIW----FSHPLSWEQCIGSVIVFGSLYAKTFVKKKSEKPPAAQEL 334

  Fly   332 PRE 334
            ||:
plant   335 PRD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 62/312 (20%)
UTR5NP_190204.2 UAA 21..322 CDD:462479 62/311 (20%)

Return to query results.
Submit another query.