DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5281 and Slc35f1

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001102808.1 Gene:Slc35f1 / 502421 RGDID:1559576 Length:408 Species:Rattus norvegicus


Alignment Length:409 Identity:82/409 - (20%)
Similarity:149/409 - (36%) Gaps:111/409 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PENLELQQFQEGAPPPDPAP-----RWLERLQRRLGADCPYLGILLAT----------------- 44
            |...:||      |||.|||     ..:|.|... |:.|    :.|:|                 
  Rat     6 PPQPQLQ------PPPPPAPPNHVVTTIENLPAE-GSGC----VSLSTSSRAGMRQRIRKVLNRE 59

  Fly    45 --LSSLFFSLCSVIVKGLVDVNPMELASFR-----FVGVLLPALPILIYTRQPVFPEGKRVIL-L 101
              :|.....:.|::|.|:...:......|.     |...|...|..|:||......:|:..:| :
  Rat    60 MLISVALGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAI 124

  Fly   102 LR------CFMGTTGLMLSFY---AFRHMPLADASVI-IFSTPVFVAIFARAFLKEPCTLFNVLT 156
            ||      ..:|...|..::.   |:::..|....:: .|..|| |.:.:..||.......:.:.
  Rat   125 LRRRWWKYMILGFIDLEANYLVVKAYQYTTLTSVQLLDCFVIPV-VILLSWFFLLIRYKAVHFIG 188

  Fly   157 INMTLLGV-------VLITRPPFVFGDTAESEDVAGKTYDIWGPVAAISSTLFG-ANVY--ILLR 211
            |.:.:||:       ||:.|           ...||:...:...:....:||:| :||:  .::|
  Rat   189 IVVCILGMGCMVGADVLVGR-----------HQGAGENKLVGDLLVLGGATLYGISNVWEESIIR 242

  Fly   212 ALKNLHFSVIMTNFGTI--ALVYTLIVCASIGAVCWPSCGRDRWLVVVL---------GVFSFLG 265
            .|..:.|..::..||..  .:...::....:..|.|.      |.:.:|         |::||:.
  Rat   243 TLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWD------WQIGLLYVGFSACMFGLYSFMP 301

  Fly   266 QIL-------LTLSLQIEQAGPVAIARCADIVFAFVWQMLFFGETPTAYSLVGAVMVMGSVVLTA 323
            .::       :.|||           ..||:...|....||..:....|.|....:::|.|:.::
  Rat   302 VVIKKTSATSVNLSL-----------LTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSS 355

  Fly   324 LKKWAGTLPRESSLRKRFR 342
            ...:....||   :.|:||
  Rat   356 TSTYIAQDPR---VYKQFR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 64/352 (18%)
Slc35f1NP_001102808.1 SLC35F 56..355 CDD:283644 62/327 (19%)

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