DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5281 and slc35f6

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001002559.1 Gene:slc35f6 / 436832 ZFINID:ZDB-GENE-040718-297 Length:374 Species:Danio rerio


Alignment Length:215 Identity:57/215 - (26%)
Similarity:83/215 - (38%) Gaps:54/215 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LGILLATLSSL---FFSLCSVIVKGLVDVNPMELASFRFVGVLLPALPILIYTRQPVFPEGKRVI 99
            :|:.|..||.|   :..||....:....::|.|  ||..:..|.|||                  
Zfish    52 VGMFLGELSCLVVFYILLCHDRRRPEPTMDPGE--SFNPLVFLPPAL------------------ 96

  Fly   100 LLLRCFMGTTGLMLSFYAFRHMPLADA------SVIIFSTPVFVAIFARAFLKEPCTLFNVLTIN 158
                |.|..|.:|   |...:|..|.:      :||||:..:.||...|..  :|...|.:|   
Zfish    97 ----CDMLGTSIM---YVALNMTSASSFQMLRGAVIIFTGLLSVAFLGRRL--KPSQWFGIL--- 149

  Fly   159 MTLLGVVLITRPPFV--FGDTAE--SEDVAGKTYDIWGP-VAAISSTLFGANVYILLRALKNLH- 217
            :|:||:|::....||  .||.:.  ||.:.|....|... |.|:...|....||     ..|:| 
Zfish   150 ITILGLVVVGLADFVSGHGDDSHKLSEIITGDLLIIMAQIVVAVQMVLEEKFVY-----KHNVHP 209

  Fly   218 FSVIMTN--FGTIALVYTLI 235
            ...:.|.  ||.:.|...||
Zfish   210 LKAVGTEGVFGFVILSLLLI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 57/215 (27%)
slc35f6NP_001002559.1 RhaT 63..333 CDD:440461 52/204 (25%)

Return to query results.
Submit another query.